Part of scaffold_1208 (Scaffold)

For more information consult the page for scaffold_1208 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MBD3 ENSTTRG00000004412 (Bottlenosed dolphin)

Gene Details

methyl-CpG binding domain protein 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004155, Bottlenosed dolphin)

Protein Percentage 98.28%
cDNA percentage 97.57%
Ka/Ks Ratio 0.02241 (Ka = 0.0064, Ks = 0.2843)

MBD3 ENSBTAG00000038409 (Cow)

Gene Details

methyl-CpG-binding domain protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003926, Cow)

Protein Percentage 94.5%
cDNA percentage 93.0%
Ka/Ks Ratio 0.0359 (Ka = 0.0223, Ks = 0.6199)

MBD3  (Minke Whale)

Gene Details

methyl-CpG binding domain protein 3

External Links

Gene match (Identifier: BACU006479, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 98.86%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1492)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 702 bp    Location:200714..195072   Strand:-
>bmy_15768
ATGGACCTGAGCACCTTCGACTTCCGCACGGGCAAGATGCTGATGGGCAAGATGAACAAGAGCCGGCAGCGGGTGCGCTACGACTCCCCGAGCCAGGTCAAGGGCAAGCCCGACCTGAACACGGCCCTCCCGGTCAGGCAGACGGCGTCCATCTTCAAGCAGCCAGTGACCAAGATCACCAACCACCCCAGCAACAAGGTGAAGAGCGACCCCCAGAAGGCCGTGGAGCAGCCCCGTCAGCTCTTCTGGGAGAAGAAGCTGAGCGGCCTGAATGCCTTTGACATCGCAGAGGAGCTCGTGAAGACCATGGACCTCCCCAAGGGCTTGCAAGGCGTGGGTCCCGGCTGCACGGATGAGACGCTGCTCTCGGCCATCGCCAGCGCCCTGCACACCAGCACCATGCCCATCACCGGGCAGCTCTCAGCCGCCGTGGAGAAGAACCCTGGGGTGTGGCTCAACACAGCCCAGCCGCTCTGCAAGGCCTTCATGGTGACTGACGAGGACATCAGGAGGCAGGAGGAGCTGGTACAGCAGGTCCGCAAGCGGCTGGAGGAGGCGCTGATGGCCGACATGCTGGCCCACGTGGAGGAGCTGGCCCGGGACGGCGAGGCGCCGCTGGACAGGGTGGGCGCCGACGAGGATGAGGACGACGAGGACCAGGAGGAGGGGCCCGACCAGGACCAGGAGATGGAGCACGTCTAG

Related Sequences

bmy_15768T0 Protein

Length: 234 aa      View alignments
>bmy_15768T0
MDLSTFDFRTGKMLMGKMNKSRQRVRYDSPSQVKGKPDLNTALPVRQTASIFKQPVTKITNHPSNKVKSDPQKAVEQPRQLFWEKKLSGLNAFDIAEELVKTMDLPKGLQGVGPGCTDETLLSAIASALHTSTMPITGQLSAAVEKNPGVWLNTAQPLCKAFMVTDEDIRRQEELVQQVRKRLEEALMADMLAHVEELARDGEAPLDRVGADEDEDDEDQEEGPDQDQEMEHV*