Part of scaffold_1220 (Scaffold)

For more information consult the page for scaffold_1220 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CPNE3 ENSTTRG00000002280 (Bottlenosed dolphin)

Gene Details

copine III

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002141, Bottlenosed dolphin)

Protein Percentage 96.06%
cDNA percentage 96.5%
Ka/Ks Ratio 0.31091 (Ka = 0.0101, Ks = 0.0326)

CPNE3 ENSBTAG00000015536 (Cow)

Gene Details

copine-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020644, Cow)

Protein Percentage 96.06%
cDNA percentage 93.81%
Ka/Ks Ratio 0.10142 (Ka = 0.0201, Ks = 0.1984)

CPNE3  (Minke Whale)

Gene Details

copine III

External Links

Gene match (Identifier: BACU006256, Minke Whale)

Protein Percentage 93.6%
cDNA percentage 95.17%
Ka/Ks Ratio 0.55819 (Ka = 0.043, Ks = 0.077)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1602 bp    Location:76927..46173   Strand:-
>bmy_15811
ATGGCTGCCCAGTGTGTCACGAAGGTGGAGCTGAATATTTCCTGTGACAATCTTTTGGATAAAGATGTAGGGTCAAAGTCAGACCCTTTATGTGTGTTATTTTTGAATACGAGTGGTCAACAGTGGTATGAGGTTGAGCGCACAGAAAGGATTAAGAATTGCTTGAATCCCAAATTTTCCAAGACATTTATTATTGATTACTACTTTGAAGTGGTTCAGAAATTGAAATTTGGGATTTATGACATTGACAACAAAACTATCGAGCTGAGTGATGACGACTTCTTAGGAGAATGTGAATGTACCCTTGGACAAATTGTTTCCAGTAAGAAACTAACTCGACCACTGGTGCTTAAAAATGGCAGACCTGCAGGGAAAGGAAGCATTACGATTTCAGCTGAAGAAATAAAGGATAACAGAGCTGTCTTGTTTGAAATGGAAGCAAGAAAACTGGATAATAAGGATCTATTTGGAAAGTCAGATCCATACCTGGAATTCCACAAGCAGATGTCTGATGGAAACTGGCTAATGGTTCATCGAACAGAGGTTATTAAAAACAACTTGAATCCTGTTTGGAGGCCTTTTAAAATCTCTCTTAACTCCCTGTGCTATGGAGATATGGATAAAACTATTAAGGTAGAGTGTTATGATTATGACAATGATGGGTCCCATGATCTCATTGGAACATTTCAAACCACCATGACAAAACTGAAAGAAGCCTCCAGAAATTCACCTGTTGAATTTGAATGCATAAATGAAAAAAAGAGGCAAAAGAAGAAAAGCTACAAGAATTCAGGTGTTATCATTGTGAAACAGTGTGAGATTACAGTGGAATGTACATTCCTTGACTATATCATGGGAGGATGTCAACTGAATTTTACTGTGGGAGTGGACTTCACTGGCTCCAATGGTGATCCAAGGTCTCCCGACTCCCTTCATTACATCARCCCCAATGGTGTTAATGAGTATTTGACTGCAATCTGGTCTGTGGGACTGGTCATTCAAGATTATGATGCTGATAAGATGTTTCCAGCTTTTGGTTTTGGAGCTCAGATCCCACCTCAGTGGCAGGTTTCTCATGAATTTCCAATAAACTTTAATCCATCCAATCCCAACTGTAATGGAATTCAAGGCATTATAGAGGCATATCGGATCTGCCTTCCTCAGATAAAACTCTATGGACCAACTAATTTTTCTCCAATCATAAATCATGTGGCCAGGTTTGCTGCTGCAGCCACACAACAACAGACAGCTTCTCAATATTTTGTGCTCTTAATCATTACTGATGGCGTGATCACAGACCTTGATGAGACCAGACAAGCTATCGTTAACGCTGCCAAGCTGCCTATGTCCATCATCATTGTCGGAGTTGGAGGTGCTGACTTTGGTGCCATGGAGTTTCTGGATGGCGATGGCGGAAGTCTCCGCTCTCCGTCGGGCGAGGTAGCCATCAGGGATATTGTCCAGTTTGTGCCTTTCAGACAGTTCCAGAACGCTCCAAAAGAAGCGCTTGCTCAATGTGTCTTGGCGGAGATCCCCCAGCAGGTGGTAGGCTACTTCAACACATACAAACTCCTTCCTCCCAAGAACCCGGCTACGAAATGA

Related Sequences

bmy_15811T0 Protein

Length: 534 aa      View alignments
>bmy_15811T0
MAAQCVTKVELNISCDNLLDKDVGSKSDPLCVLFLNTSGQQWYEVERTERIKNCLNPKFSKTFIIDYYFEVVQKLKFGIYDIDNKTIELSDDDFLGECECTLGQIVSSKKLTRPLVLKNGRPAGKGSITISAEEIKDNRAVLFEMEARKLDNKDLFGKSDPYLEFHKQMSDGNWLMVHRTEVIKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLIGTFQTTMTKLKEASRNSPVEFECINEKKRQKKKSYKNSGVIIVKQCEITVECTFLDYIMGGCQLNFTVGVDFTGSNGDPRSPDSLHYIXPNGVNEYLTAIWSVGLVIQDYDADKMFPAFGFGAQIPPQWQVSHEFPINFNPSNPNCNGIQGIIEAYRICLPQIKLYGPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDGVITDLDETRQAIVNAAKLPMSIIIVGVGGADFGAMEFLDGDGGSLRSPSGEVAIRDIVQFVPFRQFQNAPKEALAQCVLAEIPQQVVGYFNTYKLLPPKNPATK*