Part of scaffold_1220 (Scaffold)

For more information consult the page for scaffold_1220 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

WWP1 ENSTTRG00000002250 (Bottlenosed dolphin)

Gene Details

WW domain containing E3 ubiquitin protein ligase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002117, Bottlenosed dolphin)

Protein Percentage 86.06%
cDNA percentage 86.85%
Ka/Ks Ratio 0.40451 (Ka = 0.0275, Ks = 0.068)

WWP1 ENSBTAG00000015720 (Cow)

Gene Details

NEDD4-like E3 ubiquitin-protein ligase WWP1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020867, Cow)

Protein Percentage 93.87%
cDNA percentage 93.09%
Ka/Ks Ratio 0.1754 (Ka = 0.0357, Ks = 0.2036)

WWP1  (Minke Whale)

Gene Details

WW domain containing E3 ubiquitin protein ligase 1

External Links

Gene match (Identifier: BACU006254, Minke Whale)

Protein Percentage 98.94%
cDNA percentage 99.13%
Ka/Ks Ratio 0.35353 (Ka = 0.0061, Ks = 0.0171)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2871 bp    Location:228479..135767   Strand:-
>bmy_15813
ATGAATAAGATGGAGTCGCTGCCCTTGGAGGTCGGCGTGGGGTTGGAGACAGAAATCATACTTGAGTGGAGCCCTAAGGCTGAGAAGGTAGCCAAGGGACTGTCAGATGGAGCAGTGAAAACAAAGGTCCCTCAGCAGCACAAGGTATTCAGGTTAGGGATGGCAGGAATGCCAGTGAGAGAGAAAAGAGGGGAGGAGAGAGGCCATTTCCAGCCTAGCCCACTTTCAGGAGTTTTTCCGAAATTTTCTAGTGCCAAACTAAAAAGAAAAAAGAACTGGTTTGGAACAGCAATATATACAGAAGTAGTTGTAGATGGAGAAAGTAAGAAAACAGCAAAATCCAGTAGTTCTTCTAATCCAAAATGGGATGAACAGCTAACTGTAAATGTGACCCCACAGACTACATTGGAATTTCGAGTTTGGAGTCATCACACTTTAAAAGCAGATGCTTTGTTAGGAAGAGCAACAATAGATTTGAAACAAGCTCTGTTAATACACAATAGAAAATTGGAAAGAGTGAAAGAACAATTAAAACTTTCCTTGGAAACCAAGAATGGTGTTGTGCAAACTGGTGAATTAACTGTTGTGCTTGATGGACTGGTGATTGAGCAAGAAAATAGAACAAACTGCAGCTCATCTCCAACCAGGGAAATACAGCAAAATGGTGATGCCTTACATGAAAACGGAGACCCTTCGGCAAGGACAACCACCAGGTTGGCTGCCGAAGGTACTAATGGAATAGATAATCACGTACCTACAAACACTGTAGTACAAAACTCATGCTGTTCATATGTAGTTAATGGAGACAACACACCTTCATCTCCATCTCAGGTTGCTGCCAGACCCAAAAACACACCAGCTCCAAAACCACTCACATCTGAGCCTGCCAATGACACTGTTAATGGAGAATCATCCTCATCTGCACCAACTGATAATGCTTCCACCACGGGTACTGCAGTAGTATCTGGAGAAACCGCCTTGTCTTCAAATTGCACTAGTACTACTGTCGAAGATCCTCCAGTTCAAGAAATACCGACCTCCTCAGAAAACAATGAATGTATTCTTTCTAACAGTGCAGCATTTGGGTCTGAAGCTAGGAGTACGTTAGATCCTTCTACCTCCAGTTCTGGAAGTAGCTCTGCCTTCGAAGCAGCCAAATTAAGACAGCCAGACGTCTGTGCAGAACCTGTCCAGCAGCAGTCTGGAAATGCCAACACAGAAACTCTGCCATCGGGGTGGGAACAGAGAAAAGATCCTCATGGTAGAACCTATTATGTGGATCATAACACTAGAACGACCACATGGGAGAGGCCACAACCTTTACCTCCAGGTTGGGAAAGAAGAGTTGATGATCGGGGAAGAGTTTATTATGTGGATCATAACACCAGGACAACCACCTGGCAGCGGCCTACCATGGAATCTGTGCGGAATTTTGAACAGTGGCAGTCTCAGCGGAACCAACTGCAGGGAGCTATGCAGCAGTTCAACCAACGATACCTCTACTCGGCTTCAATGTTAGCTGCAGAAAATGACCCATATGGGCCTTTGCCACCAGGCTGGGAAAAAAGAGTGGATTCAACAGACAGAGTTTACTTTGTGAATCATAACACAAAAACAACCCAGTGGGAGGATCCCAGAACTCAAGGCTTACAGAATGAAGAACCCCTGCCAGAAGGCTGGGAAATTAGGTATACCCGGGAAGGCGTTAGGTACTTTGTTGATCATAATACAAGAACAACAACATTCAAAGATCCTCGCAATGGGAAGTCATCTGTAACTAAAGGTGGTCCACAGATTGCTTATGAACGCAGCTTTAGGTGGAAACTTGCTCACTTCCGTTATTTGTGCCAGATTATGGCATTAAAACCCTATGACTTGAGGAGGCGATTATATGTAATATTTAGAGGAGAAGAAGGACTTGATTATGGTGGTCTAGCAAGAGAATGGTTTTTCTTGCTTTCACATGAAGTTTTGAACCCCATGTATTGCTTGTTTGAGTATGCTGGCAAGAACAACTACTGTCTACAGATAAATCCAGCATCAACCATTAATCCAGACCATCTTTCATACTTCTGTTTCATTGGTCGCTTTATTGCTATGGCACTTTTTCATGGAAAGTTCATTGATACTGGTTTCTCTTTACCCTTCTACAAGCGTATGCTAAGTAAAAAACTGACTATTAAGGATTTGGAATCTATTGATACTGAATTTTATAACTCCCTTATCTGGATAAGAGACAACAACATTGAAGAATGTGGCTTAGAAATGTACTTTTCTGTTGACATGGAGATTTTGGGAAAAGTTACTTCACATGACCTGAAGTTGGGAGGTTCCAATATCCTGGTGACGGAGGAGAATAAAGATGAATATATTGGTTTAATGACAGAGTGGCGTTTTTCTCGAGGAGTACAAGAACAGACCAAAGCTTTCCTGGATGGTTTTAATGAGGTTGTTCCCCTTCAGTGGCTGCAGTACTTTGATGAAAAAGAATTGGAGGTCATGTTGTGTGGCATGCAGGAGGTTGACTTAGCAGATTGGCAGAGAAACACCGTGTATCGACATTATACCAGAAACAGCAAGCAAATCATCTGGTTTTGGCAGTTTGTGAAAGAGACAGACAATGAAGTAAGAATGCGACTACTGCAGTTTGTCACTGGAACCTGCCGTTTACCTCTAGGAGGATTTGCTGAGCTCATGGGAAGTAATGGGCCTCAAAAATTTTGCATTGAAAAAGTCGGCAAAGATACCTGGTTACCAAGAAGCCACACATGTTTTAATCGCTTGGATCTACCACCATATAAGAGTTATGAACAACTAAAGGAAAAACTTCTTTTTGCAATAGAAGAGACAGAGGGATTTGGACAAGAATGA

Related Sequences

bmy_15813T0 Protein

Length: 957 aa      View alignments
>bmy_15813T0
MNKMESLPLEVGVGLETEIILEWSPKAEKVAKGLSDGAVKTKVPQQHKVFRLGMAGMPVREKRGEERGHFQPSPLSGVFPKFSSAKLKRKKNWFGTAIYTEVVVDGESKKTAKSSSSSNPKWDEQLTVNVTPQTTLEFRVWSHHTLKADALLGRATIDLKQALLIHNRKLERVKEQLKLSLETKNGVVQTGELTVVLDGLVIEQENRTNCSSSPTREIQQNGDALHENGDPSARTTTRLAAEGTNGIDNHVPTNTVVQNSCCSYVVNGDNTPSSPSQVAARPKNTPAPKPLTSEPANDTVNGESSSSAPTDNASTTGTAVVSGETALSSNCTSTTVEDPPVQEIPTSSENNECILSNSAAFGSEARSTLDPSTSSSGSSSAFEAAKLRQPDVCAEPVQQQSGNANTETLPSGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVDDRGRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRNQLQGAMQQFNQRYLYSASMLAAENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERSFRWKLAHFRYLCQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE*