Sequence detailsbmy_15820 (Coding sequence)

Part of scaffold_1230 (SequenceType object (1))

For more information consult the page for scaffold_1230 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEMA6BENSTTRG00000001724 (Bottlenosed dolphin)

Gene Details

sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001627, Bottlenosed dolphin)

Protein Percentage 85.97%
cDNA percentage 86.16%
Ka/Ks Ratio 0.20799 (Ka = 0.015, Ks = 0.0723)

SEMA6BENSBTAG00000031658 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003619, Cow)

Protein Percentage 95.15%
cDNA percentage 92.59%
Ka/Ks Ratio 0.06569 (Ka = 0.024, Ks = 0.3652)

Additional orthologs identified in other species via the OPTIC pipeline.

SEMA6B (Human)   Sema6b (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2991 bp    Location:75377..88462   Strand:+
Raw sequence 
>bmy_15820
ATGCTGGCGTCCGCTGAGTCACAAATCCTGGAAGTTCAGGGTCACAGAGAGGAAACTCCGCTGTTGCACGCAAGGCCTTCCTGTTTTTTGGCCCTGAATCCTCAGAGGCAGGCGTTCCAGGGCCAAAGTTCCCACCTCACGTCCACCTCCACGGGTTCGGGATCCCCGCACCCCGAGGCTGGGGCAGGGCTCGGAGATGTACCTGCTGCTCAGACGGGGAAACTGAGGCACGGGGCTTCCCCGGAGGCTGCGGGTGTCTTCTTGGGGCCTCCGGACTGCACTCCTTCTGGAAGGGGCGTGGAGGGCTGGGTTCCAGAGGGTGTCACCTCCTGTCGCCCTGACCTCGCCATGCGGACCCCGCGAGCGCCCCCTCCCCGCCAGGCCCTACTGCTCCTGCTGCTGCTACTGGGAGGCTCCCACGGCCTCTTCCCCGAGGAGCCGCCGCCACTCAGCGTGGCCCCCAGGGACTACCTGAACCACTATCCCGTGTTCGTGGGCAGCGGGCCAGGACACCTGACCCCCACAGAGGGCACCGACGACCTCAACATCCAGCGGGTTCTGCGGGTCAACAGGACGCTCTTCATCGGGGACAGAGACAATCTGTACCGGGTGGAGCTGGAGCCCCCCACGTCCATGGAGCTGCGGTACCAGCGGAAGCTGACCTGGCGCTCCAACCCCAGCGACATCAACGTGTGTCGGATGAAGGGCAAGCAGGAGGGCGAGTGTCGAAATTTTGTAAAGGTGCTTCTACTTCGGGACGAATCCACCCTCTTCGTGTGTGGTTCCAATGCCTTCAACCCCGTGTGTGCCAACTACAGCATGGACACACTGCAGCCCCTCGGGGACAACATCAGCGGCATGGCCCGCTGCCCATACGACCCCAAACACGCCAATGTTGCCCTCTTCTCTGAAGGGATGCTCTTCACAGCCACGGTTACCGACTTCCTAGCCATCGACGCCGTCATCTACCGCAGCCTCGGGGACCGGCCCACTCTGCGCACCGTGAAACACGACTCCAAGTGGTTCAAAGAGCCCTACTTTGTCCACGTGGTGGAGTGGGGCAGCCACATCTACTTTTTCTTCCGGGAGATCGCAATGGAGTTTAACTACCTGGAAAAGGTGGTGGTGTCCCGTGTGGCCCGGGTGTGCAAGAATGATGTGGGCGGCTCCCCTCGCGTGCTGGAGAAGCAGTGGACGTCGTTCCTGAAGGCACGGCTCAACTGCTCGGTGCCAGGGGACTCCCACTTCTACTTCAACGTGCTGCGGGCCGTCACGGGCGTGGTCAGCCTGGGGGGCCGGCCCGTGGTCCTTGCTGTTTTCTCCACGCCCAGCAACAGCATCCCCGGCTCGGCCGTCTGCGCCTTTGACATGACACAGGTGGCTGCCGTGTTTGAGGGCCGCTTCCGTGAGCAGAAGTCCCCTGAGTCCATCTGGACACCCGTGCCGGAGGACCAGGTGCCACGGCCCCGGCCCGGGTGCTGTGCAGCTCCCGGCATGCAGTACAATGCCTCCAGCGCCTTCCCGGACGAGATCCTCAACTTCGTCAAGACACACCCCCTGATGGACGAGGCAGTGCCCTCACTGGGCCACGCGCCCTGGATTGTTCGGACTCTGATGCGGTACCAGCTGACGCGAGTGGCCGTGGACGTGGGTGCTGGCCCCTGGGGCAACCAGACTGTCGTCTTCCTGGGTTCTGAGGCGGGCACTGTCCTCAAGTTCCTTGTCTGGCCCAACGCCAGTGCCTCGGGCACCACCGGGCCCAGTGTCTTCCTGGAGGAGTTTGAGACCTACCGGCCGGACAGGTGTGGACGCTCTGGGGGTGGCGAGGCAGGGCAGCGGCTGCTGAGCCTGGAGCTGGATGCAGCCTCGGGCGGCCTGCTGGCGGCCTTCCCCCGCTGTGTGGTCCGAGTGCCCGTGGCGCGCTGCCAGCAATACTCAGGATGCATGAAGAACTGTATTGGCAGTCAGGACCCCTACTGCGGCTGGGCCCCGGATGGTTCCTGCATCTTCCTCAGCCCCGGCACCAGAGCCACCTTTGAGCAGGACGTGTCCGGGGCCAGCACCTCAGGCTTAGGGGACTGTACAGGACTCCTGCGGGCCAGCCTCTCGGAGGAGCGCGCCGGGTTGGTGTCGGTGAACCTGCTGGTGACGTCGTCGGTGGCGGCCTTCGTGGTGGGCGCTGTGGTGTCCGGCTTCAGCGTGGGCTGGTACGTGGGGCTCCGCGAGCGGCGCGAGCTGGCCCGCCGCAAGGACAAGGAGGCCATCCTGGCGCACGGGGGTGGCGAGGCCGTGCTGAGCGTGAGCCGCCTGGGCGAGCGCCGGGCGGGCGGCCCCGGGGGCCGGGCCGTGGGCGGCGGCGGGCCCGGGGTTCCCCCCGAGGCCCTGCTGGCGCCCCTGATGCAGAACGGGTGGGCCAAGGCCACGCTGCTGCAGGGCGGCCCCCACGACCTGGACTCGGGGCTGCTGCCCACGCCCGAGCAGACGCCGCTGCCCCAGAAGCGCCTGCCCACCCCGCACCCGCACGCCCTGGGCCCCCGCGCCTGGGAGCACGGCCACGCGCTGCTCACGGCCTCCGTCTCATCCTCCCTCCTGCTGCTGGCCCCCGCCCGCGCCCCCGAGCCGCCCCCAGCGCCCGGCGAGCCGGCCCCCGACGCCCGCCTCTTCGTCGCGCGGCCCGGCCGCGCCTCCCACGGCGACTTCCCGCTCACCCCCCACGCCAGCCCGGACCGCCGGCGGGTGGTGTCGGCGCCCACGGGCCCCTCGGACCCGAGCTCCGCCGCCGACGGCCTCCCTCGGCCCTGGAGCCCACCGCCCACCGGCAGCCTCCGGAGGCCGGGCGCGCACGCCCCGCCCGCCGCCGCGCTGCGCCGCACGCACACGATCAACAGCGGCGAGGCCCGGCCCCGCGGCCGCCACGCCCGGCCCGGCACGGACTTGGCCCACCTCCTCTCGTACGGGGGCCCGGACAGGACTGCGCCCCCCGTGCCCTAG

Related Sequences

bmy_15820T0 SequenceType object (3)

Length: 997 aa      View alignments
>bmy_15820T0
MLASAESQILEVQGHREETPLLHARPSCFLALNPQRQAFQGQSSHLTSTSTGSGSPHPEAGAGLGDVPAAQTGKLRHGASPEAAGVFLGPPDCTPSGRGVEGWVPEGVTSCRPDLAMRTPRAPPPRQALLLLLLLLGGSHGLFPEEPPPLSVAPRDYLNHYPVFVGSGPGHLTPTEGTDDLNIQRVLRVNRTLFIGDRDNLYRVELEPPTSMELRYQRKLTWRSNPSDINVCRMKGKQEGECRNFVKVLLLRDESTLFVCGSNAFNPVCANYSMDTLQPLGDNISGMARCPYDPKHANVALFSEGMLFTATVTDFLAIDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHVVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLRAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAVFEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDEAVPSLGHAPWIVRTLMRYQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVWPNASASGTTGPSVFLEEFETYRPDRCGRSGGGEAGQRLLSLELDAASGGLLAAFPRCVVRVPVARCQQYSGCMKNCIGSQDPYCGWAPDGSCIFLSPGTRATFEQDVSGASTSGLGDCTGLLRASLSEERAGLVSVNLLVTSSVAAFVVGAVVSGFSVGWYVGLRERRELARRKDKEAILAHGGGEAVLSVSRLGERRAGGPGGRAVGGGGPGVPPEALLAPLMQNGWAKATLLQGGPHDLDSGLLPTPEQTPLPQKRLPTPHPHALGPRAWEHGHALLTASVSSSLLLLAPARAPEPPPAPGEPAPDARLFVARPGRASHGDFPLTPHASPDRRRVVSAPTGPSDPSSAADGLPRPWSPPPTGSLRRPGAHAPPAAALRRTHTINSGEARPRGRHARPGTDLAHLLSYGGPDRTAPPVP*