Sequence detailsbmy_15829 (Coding sequence)

Part of scaffold_1230 (SequenceType object (1))

For more information consult the page for scaffold_1230 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SH3GL1ENSTTRG00000001705 (Bottlenosed dolphin)

Gene Details

SH3-domain GRB2-like 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001612, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.21%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1258)

SH3GL1ENSBTAG00000006007 (Cow)

Gene Details

Endophilin-A2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007890, Cow)

Protein Percentage 98.64%
cDNA percentage 93.84%
Ka/Ks Ratio 0.01283 (Ka = 0.0066, Ks = 0.5159)

SH3GL1 (Minke Whale)

Gene Details

SH3-domain GRB2-like 1

External Links

Gene match (Identifier: BACU018520, Minke Whale)

Protein Percentage 99.71%
cDNA percentage 99.23%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0369)

Additional orthologs identified in other species via the OPTIC pipeline.

SH3GL1 (Human)   Sh3gl1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1311 bp    Location:193122..224894   Strand:+
Raw sequence 
>bmy_15829
ATGTCGGTAGCGGGGCTGAAGAAGCAGTTCTACAAGGCGAGCCAGTCGTCAGAAATGGTGGACTCCTTCTCACAGCGGGAATGGGGCTGCCCGGTGCCAGTGACGGTGCCCATGCGAAGCCAGGTGGCTGGCAGGGCCGTGGAGGCCTCAGTCAGGAACAGCATCCCTGGGAAGCCATCGTGGACGCCTGAGCCCTCGCCCTCCTCCCCTGAGGCTCACACTCTCTTCCCTACTTTCATTCCCCAGCTGGTCAGTGAGAAGGTCGGAGGGGCTGAAGGGACCAAGCTGGACGATGACTTCAAAGAGATGGAGAAGAAGGTGGATGTTACCAGCAAGGCTGTGACAGAAGTGTTGGCCAGAACCATCGAGTATCTGCAGCCCAACCCAGCCTCGCGGGCCAAGCTGACGATGCTCAACACGGTGTCCAAGATCCGAGGGCAGGTGAAGAACCCTGGCTACCCGCAGTCGGAGGGCCTGCTGGGCGAGTGCATGATCCGCCATGGAAAGGAGCTGGGCGGCGAGTCCAACTTCGGCGACGCCCTGCTGGATGCCGGGGAGTCCATGAAGCGCCTGGCTGAGGTGAAGGACTCCCTGGACATAGAGGTGAAGCAGAACTTCATCGATCCCCTCCAGAACCTGTGCGACAAGGACCTGAAGGAGATCCAGCACCACCTGAAGAAGCTGGAGGGCCGCCGCCTGGACTTTGATTACAAGAAGAAGCGGCAGGGCAAGATCCCCGATGAGGAGCTGCGCCAGGCCATGGAGAAGTTTGAGGAGTCCAAGGAGGTGGCCGAGACCAGCATGCACAACCTCCTGGAGACCGACATCGAGCAGGTGAGCCAGCTCTCCGCCCTGGTGGATGCCCAACTGGACTACCACCGGCAGGCCGTGCAGATCCTGGACGAGCTAGCTGACAAGCTCAAGCGAAGGATGCGGGAAGCCTCTTCGCGCCCCAAGCGGGAGTATAAGCCCAAGCCCCGGGAGCCCTTGGACCTCGGAGAGCCTGAGCAGTCCAACGGGGGCTTCCCCTGCGCCACGGCTCCCAAGATCACAGCTTCGTCATCTTTTCGATCTTCCGACAAGCCCACCCGGACCCCCAGCAGCAGGAGCATGCCGCCCCTGGACCAGCCGAGCTGCAAGGCCCTGTACGACTTTGAGCCTGAGAACGACGGGGAGCTGGGCTTCCACGAGGGCGACATCATCACGCTGACCAACCAGATCGACGAGAACTGGTACGAGGGCATGCTCCACGGCCAGTCCGGCTTCTTCCCCCTCAGCTACGTGGAGGTGCTGGTGCCGCTGCCCCAGTGA

Related Sequences

bmy_15829T0 SequenceType object (3)

Length: 437 aa      View alignments
>bmy_15829T0
MSVAGLKKQFYKASQSSEMVDSFSQREWGCPVPVTVPMRSQVAGRAVEASVRNSIPGKPSWTPEPSPSSPEAHTLFPTFIPQLVSEKVGGAEGTKLDDDFKEMEKKVDVTSKAVTEVLARTIEYLQPNPASRAKLTMLNTVSKIRGQVKNPGYPQSEGLLGECMIRHGKELGGESNFGDALLDAGESMKRLAEVKDSLDIEVKQNFIDPLQNLCDKDLKEIQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQAMEKFEESKEVAETSMHNLLETDIEQVSQLSALVDAQLDYHRQAVQILDELADKLKRRMREASSRPKREYKPKPREPLDLGEPEQSNGGFPCATAPKITASSSFRSSDKPTRTPSSRSMPPLDQPSCKALYDFEPENDGELGFHEGDIITLTNQIDENWYEGMLHGQSGFFPLSYVEVLVPLPQ*