Part of scaffold_1218 (Scaffold)

For more information consult the page for scaffold_1218 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM87A ENSTTRG00000002557 (Bottlenosed dolphin)

Gene Details

transmembrane protein 87A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002399, Bottlenosed dolphin)

Protein Percentage 96.79%
cDNA percentage 96.86%
Ka/Ks Ratio 0.46257 (Ka = 0.025, Ks = 0.0541)

TMEM87A ENSBTAG00000008863 (Cow)

Gene Details

transmembrane protein 87A precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011671, Cow)

Protein Percentage 94.79%
cDNA percentage 93.92%
Ka/Ks Ratio 0.24189 (Ka = 0.0356, Ks = 0.1472)

TMEM87A  (Minke Whale)

Gene Details

transmembrane protein 87A

External Links

Gene match (Identifier: BACU018637, Minke Whale)

Protein Percentage 95.96%
cDNA percentage 96.2%
Ka/Ks Ratio 0.48545 (Ka = 0.0312, Ks = 0.0643)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1500 bp    Location:226511..183734   Strand:-
>bmy_15852
ATGGCGGCGGCTGCGTGGCTTCAGGTGCTGCCTGTCATTCTTCTTCTCCTGGGGGCTCAGACGTCCCCATTGTCGCTTTTCAGTGTAGGACCGGCACCCGTCGCTGCTGCCGACCGATCCAAGTGGCACATTCCGATACCGTCGGGGAAAAATTATTTTAGTTTTGGAAAGATCCTCTTCAAAAATACCACTATCTTCCTGAAATTTGATGGAGAACCTTGTGATGTATCTTTGAATATAACCTGGTATCTGAAAAGTGCTGACTGTTACAATGAAATCTACAACTTCAAGGCAGAAGAAGTGGAGACATACTTGGAAAACCTTAAGGAAAAAAAAGGCTTGTCTGGGAAATATCAAACATCATCAAAATTGTTCCAAAACTGCAGTGAACTCTTTAAAACACAGAGTTTTTCTGGGGATTTTGTGCATCGATTGCCTCTTTTAGGAGAAAAACAGGAGGCCAAGGAGAATGGAACAAATCTTACCTTTACTGGAGACAAAACTGTAATGACTGTTGAAGTGAAAGGTCCCTATGAATACCTCACGCTTGAAGAATACCCATTGATGATTTTTTTCATGGTGATGTGTATTGTATATGTCCTATTTGGTGTTCTGTGGCTGGCATGGTCTGCTTGCTATTGGAGAGATCTCCTGAGAATTCAGTTTTGGATTGGTGCTGTCATCTTCCTGGGAATGCTTGAGAAAGCTGTCTTCTATGCAGAATATCAGAACATCCGATACAAAGGAGAATCTGTCCAAGGTGCCCTGATCCTTGCAGAGCTGCTTTCAGCAGTTAAACGCTCACTGGCTCGAACCCTGGTCATCATAGTCAGTCTGGGATATGGCATAGTCAAGCCTCGCCTTGGAGTCACTCTTCACAAGGTTGTGGTAGCAGGAGCCCTTTATCTTTTGTTCTCTGGCATGGAAGGGGTCCTCAGAGTTACTGGGGCCCAGACTGATCTTGCTTCCTTGGCCTTTATCCCCTTGGCTTTCCTAGACACTGCCCTGTGCTGGTGGATATCCTTCTCATTGGATTCTTTGATGGCAGTCTATTTTCTCCTTTTGGAGATGGCATCTATTGTGTTTATCATCTGGACAACCATGAAGTTCAGGATAGTGACTTGTCAGTCGGATTGGCGGGAGCTGTGGGTAGACGATGCCATCTGGCGGTTGCTGTTCTCCATGATCCTCTTTGTCATCATGGTTCTCTGGCGACCATCTGCAAACAACCAGAGGTTTGCCTTTTCACCATTGTCTGAGGAAGAGGAGGAGGATGAACAAAAGGAACCTATGCTGAAAGAAAGCTTTGAAGGAATGAAAATGAGAAGTACCAAACAAGAACCAAATGGAAATAGTAAATTAAACAAAGCACAGGAAGATGATTTAAAGTGGGTAGAAGAGAATGTTCCTTCATCTGTGACAGATGTAGCACTTCCAGCCCTTCTGGATTCAGATGAGGAACGAATGATCACGCACTTTGAAAGGTCCAAAATGGAGTAA

Related Sequences

bmy_15852T0 Protein

Length: 500 aa      View alignments
>bmy_15852T0
MAAAAWLQVLPVILLLLGAQTSPLSLFSVGPAPVAAADRSKWHIPIPSGKNYFSFGKILFKNTTIFLKFDGEPCDVSLNITWYLKSADCYNEIYNFKAEEVETYLENLKEKKGLSGKYQTSSKLFQNCSELFKTQSFSGDFVHRLPLLGEKQEAKENGTNLTFTGDKTVMTVEVKGPYEYLTLEEYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEYQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWISFSLDSLMAVYFLLLEMASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKLNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME*