Sequence detailsbmy_15854 (Coding sequence)

Part of scaffold_1218 (SequenceType object (1))

For more information consult the page for scaffold_1218 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAPN3ENSTTRG00000002559 (Bottlenosed dolphin)

Gene Details

calpain 3, (p94)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002401, Bottlenosed dolphin)

Protein Percentage 81.29%
cDNA percentage 84.88%
Ka/Ks Ratio 0.5644 (Ka = 0.1063, Ks = 0.1884)

CAPN3ENSBTAG00000008868 (Cow)

Gene Details

calpain-3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011677, Cow)

Protein Percentage 86.75%
cDNA percentage 87.53%
Ka/Ks Ratio 0.26533 (Ka = 0.0951, Ks = 0.3585)

Additional orthologs identified in other species via the OPTIC pipeline.

CAPN3 (Human)   Capn3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2109 bp    Location:342221..364804   Strand:+
Raw sequence 
>bmy_15854
ATGACCTGTGCCGCGTGTTTGCCTGCAGGGGACTGCTGGTTTCTCGCAGCCATCGCTTGCCTGACCCTGAACAAGCGACTGCTTTTCCGGGTCATACCCCATGAACAGAGTTTCACCGAAAACTACGCGGGGATCTTTCACTTCCAGTTCTGGCGCTATGGAGACTGGGTGGACGTGGTTATTGATGACTGCCTGCCAACTTACAACAATGAACTGGTTTTCACCAAATCCAACCACCACAATGAGTTCTGGAGTGCTCTGCTGGAGAAGGCTTATGCTAAGCTCCATGGTTCATATGAAGCCCTGAAAGGTGGGAACACTACAGAGGCCATGGAGGACTTCACAGGAGGAGTAACAGAGTTTTTTGAAATCAAGGATGCTCCCAGAGACATGTACAAGATCATGAAGAAAGCCATCGAGAGGGGCTCCCTCATGGGTTGCTCCATTGATACCGTTGTTCCAGTTCAGTACGAGACAAGAATGGCCTGCGGGCTGGTCAAAGGCCACGCCTACTCGGTCACTGGGCTGGAGGAGGCCCTGTACAAGGGTGAGAAAGTGAAGCTGGTGCGGCTGCGGAACCCCTGGGGCCAGGTGGAGTGGAATGGCCCCTGGAGTGACAGTTGGAAGGACTGGAGCTTTGTGGGCAAGAACGAGAAGGCCCGTCTGCAACACCAGGTCACGGAGGATGGAGAGTTCTGGATGTCCTATGATGATTTCATCTACCATTTCACAAAGCTGGAGATCTGCAACCTCACAGCTGATGCCCTGGAGTCCGACAAGCTTCAGACTTGGACAGTGTCCGTGAACGAGGGCCGCTGGGTGAGGGGCTGCTCTGCTGGAGGCTGCCGCAACTTCCCAGACACTTTCTGGACCAACCCTCAGTACCGTCTGAAGCTCCTGGAGGAGGACGACGACCCTGACGACTCCGAGGTGATCTGCAGCTTCCTGGTGGCCCTGATGCAGAAGAACCGGCGGAAGGACCGGAAGCTGGGGGCCAACCTCTTCACCATCGGCTTCGCCATCTACGAGATGCACGGGAACAAGCAGCACCTGCAGAAGGACTTCTTCCTGTACAACGCCTCCAAGGCCAGGAGYAAAACCTACATCAACATGCGGGAGGTGTCTGAGCGCTTCCGCCTGCCTCCCAGCGAGTACGTCATTGTGCCCTCCACCTACGAGCCCCACCAGGAGGGGGAATTCATCCTCCGGGTCTTCTCTGAAAAGAGGAACCTCTCTGAGGGAGTTGAGAATACAATCTCTGTGGATCGGCCAGTGGTAAGTGGTTTGGCTCTTACGTGTGAGAAGGCCCAGGGGACAGAAAAAGAAAAAAACCAAGGTGGGTGTAAGAGGCCTATCATCTTCGTTTCAGACAGAGCAAACAGCAACAAGGAGCTGGGTGTGGACCAGGAATCAGAGGAGGGCAAAGATAAAACAAGCCCTGATAAGCAAGCGAAATCCCCACAGGACATGGAGGTCTGTGCAGATGAGCTCAAGAATATCCTTAACAGAGTTGTGAACAAACGTGAGTGGCTCAAACTCTGTGAGAAACAGCACTATGACACAGACCAATCCGGCACCATCAACAGCTATGAGATGCGAAATGCAGTCAATGACGCAGGTGTGGGGAAGAAAGGGGGTGGCCAGGATGCGGACTGGAGCCGGCCACAGAGTGACCAGGAGGCAGGGGAGATAGCAAGCAGGCCTGAGGACTTCAAGCCTACCTCCACCTCTCCTGTGCTCTCCCCAACAGGCTTCCACCTCAACAACCAGCTCTACGACATCATCACCATGCGCTATGCAGACAAGTACATGAACATCGACTTCGACAGAGCTTTTAATGCATTTGACAAGGATGGTGACGGTATCATCAAACTCAACGTTCTAGAGGTAAAGCCTAATAGAAGCAGTACAATCCCCCTGTACCTTAAAATTCGAGGTAGAGGAATCCATGAGGAAGACTGGACACACTATGTGCTCCTCACTTCCCAACGGTGGTGGAGGGATGGGACGGGAAAGGAACATAAAAGGGAGCTCACGGCTCAGCAGGATGTGGCTCATAGGGAACGTGTACTGGGGGAAGGCTCCAAAGAGGCCTCAGTTCTACAATGA

Related Sequences

bmy_15854T0 SequenceType object (3)

Length: 703 aa      
>bmy_15854T0
MTCAACLPAGDCWFLAAIACLTLNKRLLFRVIPHEQSFTENYAGIFHFQFWRYGDWVDVVIDDCLPTYNNELVFTKSNHHNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFEIKDAPRDMYKIMKKAIERGSLMGCSIDTVVPVQYETRMACGLVKGHAYSVTGLEEALYKGEKVKLVRLRNPWGQVEWNGPWSDSWKDWSFVGKNEKARLQHQVTEDGEFWMSYDDFIYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEMHGNKQHLQKDFFLYNASKARSKTYINMREVSERFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEGVENTISVDRPVVSGLALTCEKAQGTEKEKNQGGCKRPIIFVSDRANSNKELGVDQESEEGKDKTSPDKQAKSPQDMEVCADELKNILNRVVNKREWLKLCEKQHYDTDQSGTINSYEMRNAVNDAGVGKKGGGQDADWSRPQSDQEAGEIASRPEDFKPTSTSPVLSPTGFHLNNQLYDIITMRYADKYMNIDFDRAFNAFDKDGDGIIKLNVLEVKPNRSSTIPLYLKIRGRGIHEEDWTHYVLLTSQRWWRDGTGKEHKRELTAQQDVAHRERVLGEGSKEASVLQ*