Part of scaffold_1248 (SequenceType object (1))

For more information consult the page for scaffold_1248 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLIP4ENSTTRG00000008301 (Bottlenosed dolphin)

Gene Details

CAP-GLY domain containing linker protein family, member 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007862, Bottlenosed dolphin)

Protein Percentage 93.74%
cDNA percentage 94.71%
Ka/Ks Ratio 0.40816 (Ka = 0.0409, Ks = 0.1001)

CLIP4ENSBTAG00000007378 (Cow)

Gene Details

CAP-Gly domain-containing linker protein 4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009702, Cow)

Protein Percentage 94.32%
cDNA percentage 94.37%
Ka/Ks Ratio 0.17991 (Ka = 0.0278, Ks = 0.1544)

CLIP4 (Minke Whale)

Gene Details

CAP-GLY domain containing linker protein family, member 4

External Links

Gene match (Identifier: BACU014573, Minke Whale)

Protein Percentage 98.95%
cDNA percentage 98.75%
Ka/Ks Ratio 0.22123 (Ka = 0.0065, Ks = 0.0295)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 2199 bp    Location:527770..467721   Strand:-
>bmy_15877
ATGACCATAGAGGACCTTCCGGATTTTCCATTAGAAGGAAGTTCTTTGATTGGAAGATACCCATTTTTATTTCAAGGTTCTGATACACCAGTTATCTTTTCCATTTCTGCAGCACCAATGCCTTCAGACTGTGAGTTTTCTTTCTTTGATCCTAATGATACGTCATGCCAGGAAATTCTCTTCGATCCCAAAACTTCTGTATCAGAATTATTTGCCATCTTAAGACAGTGGGTTCCTCAGGTCCAGCAAAATATTGATGTTATTGGAAATGAGGTTTTTCATGGAGCAATTCTTAAGAGAGGTTGCAACGTGAATGACAGAGATGGATTGACAGATATGACTCTTTTACATTATACTTGCAAATCTGGAGCTCATGGTATTGGTGATGTTGATACAGCTGTAAAATTTGCAACTCAACTTATTGATCTGGGAGCAGATGTTAGTTTGCGGAGTCGCTGGACAAATATGAATGCTTTGCATTATGCTGCTTATTTTGATGTCCCTGAACTTATAAGAGTGATTTTGAAGACATCTAAACCAAAAGGCAAGTACTATGTGGATGCCACTTGCAGTGACTTTAATTTTGGAACAGCTCTGCATATTGCTGCATATAACTTGTGTGCAGGTACTGTGAAATGCTTATTGGAGCATGGAGCAAATCCTGCATTTAGGAATGACAAAGGACAGATACCCGCTGACGTTGTCCCAGACCCGGTCGAAATGCCCTTAGAAATGGCCGATGCCGCGGCAACTGCTAAAGAAATCAAGCAGATGCTGCTCGATGCAGTGCCTCTGTCATGTGATCTCTCAAAGCCCTTGCTTCCAAGTTATGATCGTGTTACTAGCAAGGTGATGCTGACGTCACTTGGCCTGAAGCTGGGGGATCGTGTCGTTATTGCAAGACAGAAGGTTGGAACATTAAGATTTTGTGGAACAACTGAATTTGCAAGTGGGCAGTGGGCTGGCATTGAGTTGGATGAACCAGAAGGAAAAAACAATGGAAGTGTTGGGAAAGTCCAGTACTTTAAATGTGCCCCCAAATATGGTATTTTTGCACCCCTTTCAAAGATAAGTAAAGCAAAAGATCGAAGGAAGAATACAGCACACACTCCTTCTACAAAAGCTGTACCTCTCATCAGGTCCCAGAAAATTGATGTAGCTCATGTAACGTCAAAAGTAAATACTGGATTAATGACATCAAAAAAAGATAGTGCTTCAGAATCAACACTTTCATTGCCTCCTGGTGAAGAATTGAAAACTGGAGCAGAGAAAGATGTTACCCTGCTTGGATCCGTCAGCAGCTCCTCCTCTACATCTTCTTTGGAGCACAAACAGAGTCACTCCAAGAAACTGAATGCAAGTGGCAATAACAAGAAGACAATGAGCAAAAGCCCTTCTGTCTCATCTAGAGCCAGTGCCGTTTCCCTTTGTTTTTTCTCTTTTCCTGCCCCATCCCTTTCCCCAACCAACCCCAAAACAGGTTTGAATTCCTCAGCAACATCTGTAGCAAATAATGCATGCTGTGAAGGAGAACTCTGCCTTGGAGATAGGGTGTTGGTGGTAGGCCAGAGAACCGGTACCATTAAGTTCTTTGGGACAACAAACTTTGCTCCAGGATATTGGTACGGGATAGAGCTTGATAAACCCCATGGCAAGAATGATGGTTCAGTTGGAGGTGTGCAGTATTTTAGTTGTTCCCCAAGATATGGAATATTTGCTCCCCCATCCAGGGTACAAAGGGTAACAGATTCCCTGGATACTCTTTCAGAAATTTCTTCAAATAAACAGAATCATTCTTATCCTGGTTTTAGGAGAAGTTTCAGTACAACTTCTGCTTCTTCCCAGAAAGAGATTAACAGAAGAAATGCTTTTGCCAAGTCGAAGCCCGCTCTGCGCCGCAGCTGGAGCGGCAGCACCACGGCCGGCGGCCTGGAGGGGAGCGTGCGGCTGCACGAGGGCTCCCAGGTCCTCCTCACCAGCTCCAGCGAGATGGGCACCGTTAGGTACGTGGGCCCCACTGACTTTGCCTCAGGGATCTGGCTTGGACTGGAGCTTCGAAGCGCCAAGGGAAAGAATGATGGGGCAGTGGGAGACAAACGCTACTTCTCCTGCAGGCCAAACCATGGGGTCCTAGTGAGGCCCAGCAGAGTGACCTACCGGGGGATAAACGGGTCAAAGCTTGTGGATGAGAATTGCTGA

Related Sequences

bmy_15877T0 SequenceType object (3)

Length: 733 aa      View alignments
>bmy_15877T0
MTIEDLPDFPLEGSSLIGRYPFLFQGSDTPVIFSISAAPMPSDCEFSFFDPNDTSCQEILFDPKTSVSELFAILRQWVPQVQQNIDVIGNEVFHGAILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVDTAVKFATQLIDLGADVSLRSRWTNMNALHYAAYFDVPELIRVILKTSKPKGKYYVDATCSDFNFGTALHIAAYNLCAGTVKCLLEHGANPAFRNDKGQIPADVVPDPVEMPLEMADAAATAKEIKQMLLDAVPLSCDLSKPLLPSYDRVTSKVMLTSLGLKLGDRVVIARQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFAPLSKISKAKDRRKNTAHTPSTKAVPLIRSQKIDVAHVTSKVNTGLMTSKKDSASESTLSLPPGEELKTGAEKDVTLLGSVSSSSSTSSLEHKQSHSKKLNASGNNKKTMSKSPSVSSRASAVSLCFFSFPAPSLSPTNPKTGLNSSATSVANNACCEGELCLGDRVLVVGQRTGTIKFFGTTNFAPGYWYGIELDKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISSNKQNHSYPGFRRSFSTTSASSQKEINRRNAFAKSKPALRRSWSGSTTAGGLEGSVRLHEGSQVLLTSSSEMGTVRYVGPTDFASGIWLGLELRSAKGKNDGAVGDKRYFSCRPNHGVLVRPSRVTYRGINGSKLVDENC*