Sequence detailsbmy_15881 (Coding sequence)

Part of scaffold_1235 (SequenceType object (1))

For more information consult the page for scaffold_1235 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SBDSENSTTRG00000003921 (Bottlenosed dolphin)

Gene Details

Shwachman-Bodian-Diamond syndrome

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003691, Bottlenosed dolphin)

Protein Percentage 79.92%
cDNA percentage 80.46%
Ka/Ks Ratio 0.3975 (Ka = 0.007, Ks = 0.0176)

Additional orthologs identified in other species via the OPTIC pipeline.

SBDS (Cow)   SBDS (Human)   Sbds (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 753 bp    Location:86278..78265   Strand:-
Raw sequence 
>bmy_15881
ATGTCGATCTTCACCCCCACCAACCAGATCCGCCTGACCAATGTGGCCGTAGTACGAATGAAGCGAGCCGGGAAGCGCTTCGAAATCGCCTGCTACAAAAACAAAGTCGTAGGCTGGCGGAGCGGCGTGGAAAAAGACCTTGATGAAGTTCTGCAGACCCACTCAGTGTTTGTAAATGTCTCTAAAGGTCAGGTTGCAAAGAAGGAAGATCTCATCAGTGCGTTTGGAACAGATGACCAGACTGAAATCTGTAAGCAGATTTTGACTAAAGGAGAGGTTCAAGTGTCAGATAAAGAACGGCACACACAGCTGGAGCAGATGTTTAGGGACATTGCAACTATTGTGGCCGACAAATGTGTGAACCCTGAAACAAAGAGACCGTACACCGTTATCCTTATTGAGAGAGCCATGAAGGACATCCACTATTCGGTCAAACCCAACAAGAGTACAAAACAGCAGGCTTTGGAAGTGATAAAGCAGTTAAAGGAGAACATGAAGATAGAACGTGCTCACATGAGACTTCGGTTCATTGTTCCAGTGAATGAAGGGAAGAAGCTGAAAGAAAAACTCAAGCCACTCATCAAGGTTATAGAAAGTGAAGACTATGGTCAACAGTTAGATATTGTGTGTCTCATCGACCCCGGCTGCTTCCGAGAAATCGATGAGCTCGTGAAAAAGGAGACAAAAGGCAAAGGCTCTTTGGAAGTACTCAATTTGAAAGACGTGGAAGAAGGAGATGAGAAATTGGAGTGA

Related Sequences

bmy_15881T0 SequenceType object (3)

Length: 251 aa      
>bmy_15881T0
MSIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKENMKIERAHMRLRFIVPVNEGKKLKEKLKPLIKVIESEDYGQQLDIVCLIDPGCFREIDELVKKETKGKGSLEVLNLKDVEEGDEKLE*