Sequence details bmy_15885 (Coding sequence)

Part of scaffold_1235 (Scaffold)

For more information consult the page for scaffold_1235 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CALN1 ENSTTRG00000016273 (Bottlenosed dolphin)

Gene Details

calneuron 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015425, Bottlenosed dolphin)

Protein Percentage 46.53%
cDNA percentage 56.94%
Ka/Ks Ratio 0.18347 (Ka = 0.5378, Ks = 2.9311)

CALN1 ENSBTAG00000043969 (Cow)

Gene Details

calcium-binding protein 8

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053698, Cow)

Protein Percentage 45.52%
cDNA percentage 54.71%
Ka/Ks Ratio 0.0363 (Ka = 0.5162, Ks = 14.2215)

CALN1  (Minke Whale)

Gene Details

calneuron 1

External Links

Gene match (Identifier: BACU011990, Minke Whale)

Protein Percentage 14.18%
cDNA percentage 32.59%
Ka/Ks Ratio 0.1562 (Ka = 1.6572, Ks = 10.6093)

Genome Location

Sequence Coding sequence

Length: 438 bp    Location:563206..590094   Strand:+
Raw sequence 
>bmy_15885
ATGTGTCTTACCGTGTTTCCTTTCATATTCCGCACAATGACAGGCTCCATGAGCCTGTTGGACAGGCTCCATGAGCATCATGGATGCCCCTCTGTGGTCCACGAAGTCATCTTGGAGAGGGCAGAACTGGCCGTGCTGGTGCCTGGTGTGCACATGCTTCACCCATCGTCCATTGAACAGCTGTCCGTCAAGCGCCTCCTTCAGAGCGTAGAGATCCGAGAGGCCTTTCGGGTTCTGGACCGAGACGGCAATGGCTTCATCTCCAAGCAGGAGCTGGGAATGGCCATGCGCTCGTTGGGGTACATGCCGAGTGAGGTGGAGCTGGCCATCATCATGCAGCGCCTGGACATGGACGGTTCATCACTGTCTGGATGCGAAATCTTTTCAGACACCCTACAAGTAGAACACTACCGCTGCCATACACTGGTCTTTGAATGA

Related Sequences

bmy_15885T0 Protein

Length: 146 aa      View alignments
>bmy_15885T0
MCLTVFPFIFRTMTGSMSLLDRLHEHHGCPSVVHEVILERAELAVLVPGVHMLHPSSIEQLSVKRLLQSVEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGSSLSGCEIFSDTLQVEHYRCHTLVFE*