Part of scaffold_1234 (Scaffold)

For more information consult the page for scaffold_1234 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1orf110 ENSTTRG00000008611 (Bottlenosed dolphin)

Gene Details

chromosome 1 open reading frame 110

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008161, Bottlenosed dolphin)

Protein Percentage 90.27%
cDNA percentage 95.07%
Ka/Ks Ratio 1.06601 (Ka = 0.0499, Ks = 0.0469)

C3H1orf110 ENSBTAG00000027425 (Cow)

Gene Details

Coiled-coil domain-containing protein C1orf110 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039169, Cow)

Protein Percentage 80.52%
cDNA percentage 86.77%
Ka/Ks Ratio 0.42489 (Ka = 0.1117, Ks = 0.2629)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 813 bp    Location:563354..569401   Strand:+
>bmy_15895
ATGAAGAGGATGGAGAGGCACATGGTCAGGGGACCACTACAGAAGCACTTTGATTTGGAGAGGAAGAACGCCAAGCAGGCTGAAGCCAGACTCAGCCAAAGACTGCAGAGACTAGAGGATATCTGCCTATACCATGTGAAGTTGCTGACCAGGGAACAGAGAGAGCTCCAAAAAGAACTGCAGAGGTTGCAGCAAGGACAGAAGCACAGGGTTCTACAGGCTAATAAATTTAGAGCACTGACAAGCAATACGATCCAAGAAATATACAAAACCAAGTCCCAGATGCCTCCTTTCCATCACATTCRTCCCAAGGACCCCATGAAAAGCAAAAGGCAGTCGCTATCTCAAAATAACAGAACTTCCCACTTCATAGAAGAGAAGCCTCAAGCCCAAGAGAAATATTCTATAAACCCACTGAAGGGCAAAGACTCCAACAAGGGCATCTCTCTTCTATGTCAAGATCAAGAGATCTCCACTCACACCCTAGACCAAGGCCCCAGTTCCAGCCCAGTTGGTGGTAGCAGAATGGCACACGGCGATGAGACCAGATCAAATGATGCCAACATAAGGCCAGACCACGCCACTGGGAAACAAATTCCCCTGAATCCCATGGAATGTGGAGGGAACTTCAAAGGCGAGCCCAAAACATCAACCTACTTAGAGTTGTTTGCAAAGGCCAGAAACGCTCACTACCTCCGGCACCGGGTCCCCCCTGAGTCTGAGAGATTGCTTAGCATTGGGGAGATCTTTGGGCACAAGGAATCCTCACAGTCCAGAGCAGAAAAGGGGTGTGAATACAGGGTGACCATCTAA

Related Sequences

bmy_15895T0 Protein

Length: 271 aa      View alignments
>bmy_15895T0
MKRMERHMVRGPLQKHFDLERKNAKQAEARLSQRLQRLEDICLYHVKLLTREQRELQKELQRLQQGQKHRVLQANKFRALTSNTIQEIYKTKSQMPPFHHIXPKDPMKSKRQSLSQNNRTSHFIEEKPQAQEKYSINPLKGKDSNKGISLLCQDQEISTHTLDQGPSSSPVGGSRMAHGDETRSNDANIRPDHATGKQIPLNPMECGGNFKGEPKTSTYLELFAKARNAHYLRHRVPPESERLLSIGEIFGHKESSQSRAEKGCEYRVTI*