Part of scaffold_1225 (Scaffold)

For more information consult the page for scaffold_1225 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LAMP1 ENSTTRG00000004460 (Bottlenosed dolphin)

Gene Details

lysosomal-associated membrane protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004200, Bottlenosed dolphin)

Protein Percentage 89.8%
cDNA percentage 94.05%
Ka/Ks Ratio 0.40122 (Ka = 0.0485, Ks = 0.1209)

LAMP1 ENSBTAG00000010242 (Cow)

Gene Details

Lysosome-associated membrane glycoprotein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042536, Cow)

Protein Percentage 80.15%
cDNA percentage 84.4%
Ka/Ks Ratio 0.19081 (Ka = 0.1098, Ks = 0.5754)

Genome Location

Sequence Coding sequence

Length: 1254 bp    Location:99983..85657   Strand:-
>bmy_15907
ATGGCGGCCCCCGGCGGCGCCCGGCGATGGCCGCTGCTCCTGCTGCTGTTCGCAGGCCTCGTGCATGGTGCATCAGCTGTGTTTGTGGTGAAAGATGGCAATGGGACAGCTTGTATCATGGCCAACTTCTCTGCTGCCTTCTTGACCAGCTATGACACCAAGAACGGTTCTAAGAGCGTGACCTTTGAGCTGCCGGCCAGTGCAGAAGTATTAAATAGCAGCTCTTGCGGCAAAGGAAATGCTTCTGACTCCAGTCTCGTGATCGCTTTTGGAAGAGGCCATACGCTGACCCTCAGTTTCACAAGAAATGCAACACGTTACAGTGTCCAGCTGATGCGTTTTGTTTATAACTTGTCAGACACAGGGATTTTCCCAAATTCRAGCTCCAAGGAAACCAAGACTGTGGAATCTGTAACCGACATCAGGGCAGACATAAATAAAAAGTACAGGTGTGTGAGCAGCCAGCAGATCCACCTGCGCAACGTGACCATCACGCTCCGTGACGCCACCATTCAGGCCTACCTCTCCAACGGCAGCTTCAGCACGGAGGAGACGCACTGCGAGCAAGACGGGCCCTCGCCGCCCAGCCCGACGGCGCCGCCCAGCCCGACGGCACCACCCCAGCCCTCGCCCACCCCGGCGCCCGCGAGCCCCTCGGTGTCCAGGTACAACGTGAGCGGCGCCAACGGGACGTGCCTGCTGGCCAGCATGGGGCTGCAGCTGAACGTCACCTACAGGACGAGGGACAACACGACGGTGACCAGAGAGTTCAACATCGACCCCAGCAAGACCACCTTCGGGGGGAGCTGCACAGCCCGGCTGGTGACCCTGGCGCTCCGCAGCGGGAACCTGCTCCTGGTGCTGCAGTTTGCGATGAATGCAAGTTCCAGCCGGGTTTTCCTGCAGGGAGTCCAGCTGACTATGACTCTGCCCGATGCCAGAGACCCCACCTTCAGGGCCGCCAACAGCTCGCTGAGGGCGCTGCAGGCCACCGCCGGGAACTCCTACAAGTGCAACGCCGAGCAGCGCGTGCAGGTCACCGAGGCCTTCTTCCTCAACATATTCAGAGTGTGGGTCCAGGCGTTCCGCGTGGACGGGGACAAGTTTGGGCCCGCGGAGGAGTGTCAGCTGGACGAGAACAGCGTCCTGGTCCCCATCGCGGTGGGCGGCGCCCTGGCGGGGCTGGTCCTCATCGTCCTCATCGCCTACCTCATCGGCCGCAAGAGGAGCCACGCCGGCTACCAGACCATCTAG

Related Sequences

bmy_15907T0 Protein

Length: 418 aa      View alignments
>bmy_15907T0
MAAPGGARRWPLLLLLFAGLVHGASAVFVVKDGNGTACIMANFSAAFLTSYDTKNGSKSVTFELPASAEVLNSSSCGKGNASDSSLVIAFGRGHTLTLSFTRNATRYSVQLMRFVYNLSDTGIFPNSSSKETKTVESVTDIRADINKKYRCVSSQQIHLRNVTITLRDATIQAYLSNGSFSTEETHCEQDGPSPPSPTAPPSPTAPPQPSPTPAPASPSVSRYNVSGANGTCLLASMGLQLNVTYRTRDNTTVTREFNIDPSKTTFGGSCTARLVTLALRSGNLLLVLQFAMNASSSRVFLQGVQLTMTLPDARDPTFRAANSSLRALQATAGNSYKCNAEQRVQVTEAFFLNIFRVWVQAFRVDGDKFGPAEECQLDENSVLVPIAVGGALAGLVLIVLIAYLIGRKRSHAGYQTI*