Part of scaffold_1225 (Scaffold)

For more information consult the page for scaffold_1225 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCID2 ENSTTRG00000004428 (Bottlenosed dolphin)

Gene Details

PCI domain containing 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004181, Bottlenosed dolphin)

Protein Percentage 96.1%
cDNA percentage 96.68%
Ka/Ks Ratio 0.15922 (Ka = 0.0182, Ks = 0.1141)

BT.45537 ENSBTAG00000021725 (Cow)

Gene Details

PCI domain-containing protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028959, Cow)

Protein Percentage 98.71%
cDNA percentage 93.68%
Ka/Ks Ratio 0.01759 (Ka = 0.0073, Ks = 0.4171)

PCID2  (Minke Whale)

Gene Details

PCI domain containing 2

External Links

Gene match (Identifier: BACU018902, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.28%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0467)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 699 bp    Location:164383..183673   Strand:+
>bmy_15909
ATGCTGTTTCTGGTGAATCAGTTATTCAAGATCTATTTTAAGATCAACAAGCTCCACTTGTGTAAACCGCTCATCAGAGCCATCGACAGCTCCAACCTGAAGGAYGACTACAGCACCGCCCAGAGGGTGACGTACAGGTACTACGTGGGGCGGAAGGCCATGTTCGACAGCGACTTCAAGCAAGCTGAGGAGTACCTGTCCTTTGCTTTTGAGCACTGCCACCGTTTGAGCCAGAAGAACAAAAGGATGGTCCTCATTTATCTACTTCCTGTGAAGATGCTCCTGGGTCACATGCCAACCATTGAGCTCCTGAGGAAGTACCATCTCATGCAGTTTGCGGAGGTGACCAAAGCTGTGAGCGAAGGCAACCTCCTCCTCCTCAACGAGGCTCTGGCCAAGCACGAGACCTTCTTCATCCGGTGCGGCATTTTCCTCATCCTCGAGAAGCTGAAGATTATCACCTACAGGAATCTTTTTAAGAAAGTGTACCTGTTACTCAAGACACACCAGCTGTCTCTGGATGCGTTCCTGGTTGCCTTGAAGTTCATGCAGGTGGAGGACGTGGACATCGCCGAGGTCCAGTGCATCCTGGCCAACCTGATCTACATGGGTCACATTAAAGGCTACATCTCGCACCAGCACCAGAAGCTGGTTGTCAGCAAGCAGAACCCGTTCCCCCCGCTGTCCACGGTGTGCTGA

Related Sequences

bmy_15909T0 Protein

Length: 233 aa      View alignments
>bmy_15909T0
MLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRLSQKNKRMVLIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTKAVSEGNLLLLNEALAKHETFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIAEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTVC*