Part of scaffold_1231 (Scaffold)

For more information consult the page for scaffold_1231 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDCD2 ENSBTAG00000011179 (Cow)

Gene Details

Programmed cell death protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014845, Cow)

Protein Percentage 87.33%
cDNA percentage 90.67%
Ka/Ks Ratio 0.32998 (Ka = 0.0676, Ks = 0.205)

PDCD2  (Minke Whale)

Gene Details

programmed cell death 2

External Links

Gene match (Identifier: BACU011689, Minke Whale)

Protein Percentage 72.91%
cDNA percentage 79.04%
Ka/Ks Ratio 0.49763 (Ka = 0.2083, Ks = 0.4186)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 903 bp    Location:29271..36254   Strand:+
>bmy_15934
ATGGCAGCCGCGAGCAGCGGGCTGACTGAGCTGGGTTTCGTGGAGGCGGCGCCGGCGTGGCGGCTGCGCAGCGAGCAGTTCCCCAGCAAGGTGGGCGGCCGGCCGGCGTGGCTGGGCGCAGCCGGGCTGCCGGGGCCCGCGGGGCTGGCCTGCGCGCAGTGCGGCCGCCCACTGGCCTTCCTGCTGCAGCTGTACGCGCCGCTCCCGGGCCGCGCCGACGCCTTCCACCGCGGTCTCTTCCTTTTCTGTTGCCGAACGCCACCGTGCTGCGCCGGCCTACGCGTTTTTAGAAATCAGTTGCCCAGGAGAAATGACTTCTACGCCTATGAGCCACCTTCTGAGGATCCTCCGCCAGAGACAGGAGAATCCGTGTGCCTCCAGCTCAAGTCTGGTGCTCATCTCTGCAGAGTTTGTGGCTGTTTAGGCCCCAAAACCTGCTCCAGATGTCACAAGGCACATTACTGCAGTAAGGAGCATCAGACTCTCGACTGGAGATTGGGACATAAGCAGGCTTGTACACAAGCAGGTGAAGCACCTGAGGAAGAATTGGATTCCATGGCAAAACATGAATCTAGGGAAGATAGAATTTTTCAGAAGTTTAAAACCAAAATATCCCTTGAACCAGAACAGATTCTCAGATATGGCAGAGGGATTGCCCCCATCTGGATCTCTGGTGAAAATATCCCTCAAGAAAAGGAGATTCCAGATTGCCCTTGTGGTGCCAAGAGAATATTTGAATTCCAGGTCATGCCTCATCTGCTCAACTACCTGAAGGCCGACAGACTGGGCAGGAGTGTCGACTGGGGCGTCCTGGCCATCTTCACCTGTGCTGAAAGCTGTGGCCTGGGCACTGGCTACACAGAGGAATTTGTTTGGAAGCAAGATATAACAGATGCCGCCTAA

Related Sequences

bmy_15934T0 Protein

Length: 301 aa      View alignments
>bmy_15934T0
MAAASSGLTELGFVEAAPAWRLRSEQFPSKVGGRPAWLGAAGLPGPAGLACAQCGRPLAFLLQLYAPLPGRADAFHRGLFLFCCRTPPCCAGLRVFRNQLPRRNDFYAYEPPSEDPPPETGESVCLQLKSGAHLCRVCGCLGPKTCSRCHKAHYCSKEHQTLDWRLGHKQACTQAGEAPEEELDSMAKHESREDRIFQKFKTKISLEPEQILRYGRGIAPIWISGENIPQEKEIPDCPCGAKRIFEFQVMPHLLNYLKADRLGRSVDWGVLAIFTCAESCGLGTGYTEEFVWKQDITDAA*