Part of scaffold_1242 (Scaffold)

For more information consult the page for scaffold_1242 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPC25 ENSTTRG00000006112 (Bottlenosed dolphin)

Gene Details

SPC25, NDC80 kinetochore complex component

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005781, Bottlenosed dolphin)

Protein Percentage 97.35%
cDNA percentage 97.94%
Ka/Ks Ratio 0.2179 (Ka = 0.0099, Ks = 0.0456)

SPC25 ENSBTAG00000010048 (Cow)

Gene Details

Kinetochore protein Spc25

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013248, Cow)

Protein Percentage 92.92%
cDNA percentage 93.95%
Ka/Ks Ratio 0.17199 (Ka = 0.0302, Ks = 0.1754)

SPC25  (Minke Whale)

Gene Details

SPC25, NDC80 kinetochore complex component

External Links

Gene match (Identifier: BACU010102, Minke Whale)

Protein Percentage 99.12%
cDNA percentage 99.26%
Ka/Ks Ratio 0.28262 (Ka = 0.0024, Ks = 0.0084)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 681 bp    Location:32698..20117   Strand:-
>bmy_15946
ATGGTAGAGGACGAACTGGCACTATTCGATAAAAGCATAAATGAATTTTGGAATAAATTCAAAAGCACTGTCAGTGACACCTCCTGTCAGATGGTGGGCCTAAGAGATACCTACAAGGATTCCATTAAAGCATTTGCAGAAAAGCTGTCTGTGAAATTAAAGGAAGAAGAACGAATGGTTGAGATGTTTCTGGARTATCAAAATCAGATCTGCAGGCAGAATAAGCTCATTCAAGAAAAGAAAGAGAATTTGTTGAAGTTGATTGCTGAAGTAAAAGACAAAAAGCAGGAATTGGACACACTGACTGCAAATATCCAGGATCTTAAGGAAGAATATGCTAGGAAGAGGGAAACTATTTCCACTGCTAACAAAGCTAATGAAGAGAGGTTGAAAAGGCTACAGAAATCTGCAGACCTGTATACAGATCGACTTGGACTAGAAATTCRAAAAATTTATGGTGATAAGTTGCAGTTTATATTCACTAACATTGACCCTAAGCATCCTGAGAGCCCATTTATGTTTTCCCTGAGCTTAAATGAAGCAAGGGACTATGAAGTGTCAGATAGTGCTCCTCATCTTGAGTGCCTAGCAGAATTTCAGGAAAATGTAAGGAAGACCAACAATTTTTCGGCTTTTCTTGCCAATGTTCGGAAAGCTTTTACTGCTATTGTTTATAATTAA

Related Sequences

bmy_15946T0 Protein

Length: 227 aa      View alignments
>bmy_15946T0
MVEDELALFDKSINEFWNKFKSTVSDTSCQMVGLRDTYKDSIKAFAEKLSVKLKEEERMVEMFLEYQNQICRQNKLIQEKKENLLKLIAEVKDKKQELDTLTANIQDLKEEYARKRETISTANKANEERLKRLQKSADLYTDRLGLEIXKIYGDKLQFIFTNIDPKHPESPFMFSLSLNEARDYEVSDSAPHLECLAEFQENVRKTNNFSAFLANVRKAFTAIVYN*