Part of scaffold_1242 (Scaffold)

For more information consult the page for scaffold_1242 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABCB11 ENSTTRG00000006114 (Bottlenosed dolphin)

Gene Details

ATP-binding cassette, sub-family B (MDR/TAP), member 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005784, Bottlenosed dolphin)

Protein Percentage 80.1%
cDNA percentage 81.64%
Ka/Ks Ratio 0.58866 (Ka = 0.064, Ks = 0.1086)

ABCB11 ENSBTAG00000026885 (Cow)

Gene Details

bile salt export pump

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043977, Cow)

Protein Percentage 87.29%
cDNA percentage 88.96%
Ka/Ks Ratio 0.32395 (Ka = 0.0827, Ks = 0.2553)

ABCB11  (Minke Whale)

Gene Details

ATP-binding cassette, sub-family B (MDR/TAP), member 11

External Links

Gene match (Identifier: BACU010103, Minke Whale)

Protein Percentage 93.72%
cDNA percentage 94.83%
Ka/Ks Ratio 0.70846 (Ka = 0.0496, Ks = 0.0701)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2505 bp    Location:153875..95798   Strand:-
>bmy_15949
ATGGAAGGACCAACAAGAAGAGAGAGGAACGGATATGGGTGGCAGCATAAAGCTTTGGAACGGGTTAGAAAACTTTGTGACTCTCCACAGTGGAGTCCATTGTTTCTTCTGGCTTCTTCAATTTCACGTTCACAGCATTGTTGGCTGTGGACTGCAATTACCATGTCTGACTCGGTAATTCTTCTCAGCATGAAGAAATCTGGAGAGGACAATCATGGTTTTGAGTCAGACAGATCATATGACAATGATAAGAAATCAAAGTTAGAAGATAAGAAGAAGAAAGGTGGCAGCAGTCAAGTTGGCTTCTTTCAATTGTTTCGATTTTCTTCAAAGACTGACATTTGGCTGATGTTTGTGGGAAGTTTATGTGCATTTCTCCATGGAGTAGCCTATCCAGGCGTGCTACTGATTTTTGGCACAATGACAGATGTTTCTATTGAGTATGACATGGAATTACAAGAACTCAAGATCCCTGGAAAAGCATGTGTGAATAACACGATAGTATGGACCAACGGCTCCCTCTACCAGAACGTGACAAATGGAACGCGCTGTGGGTTTCTGGACATTGAAAGTGAAATGGTCAAGTTTGCCAGTTACTATGCTGGCATTGCTGTCGCGGTACTTGTCACAGGATATATTCAAATATGCTTTTGGGTAATTGCGGCAGCTCGTCAGATACAGAAAATGAGAAAACTGTACTTTAGGAGAATAATGAGAATGGAAATAGGATGGTTCGACTGCAATTCAGTGGGAGAGCTGAATACAAGATTTTCTGATGATATTAACAAAATCAATGATGCCATTGCCGACCAAATGGCCATTTTCATTCAGCGCATGACCACGAGCGTCTGTGGGTTCCTGCTGGGATTTTACCGGGGTTGGAAACTGACCTTGGTTATTATCTCTGTCAGCCCTCTCATTGGGATTGGAGCAGCCATCATTGGTCTGAGTGTGTCCAAGTTTACAGACCATGAATTGAGGGCCTATGCCAAAGCAGGGGCAGTGGCTGATGAAGTCATCTCATCTATTCCAACAGTGGCTGCTTATGGTGGTGAGAAAAAAGAGGTTGAAAGGTATGAGAAAAATCTTGTGTTTGCCCAGCGTTGGGGAATTAGAAAAGGGATAGTGATGGGGTTCTTTACTGGATTCATGTGGTGTCTCATCTTCTTGTGTTACGCTCTGGCCTTCTGGTACGGCTCCAGACTCGTCCTGGATGATGGAGAATATACAGCAGGAACCCTTGTCCAGATTTTCCTCAGTGTCATAGTAGGAGCTTTAAATCTTGGCAATGCCTCTTCCTGTTTGGAAGCCTTTGCAGCTGGCCGTGCAGCAGCCACGAGCATTTTTGAGACAATGGACCGGAAACCCCTCATTGACTGCATGTCAGAAGATGGTTACAAGCTGGATCGAATTAAGGGTGAAATTGAATTCCATAATGTGACCTTCCACTATCCTTCCAGACCAGAGGTGAAGATTTTAAATAACTTAAGCATGGTCATTAAATCAGGGGAAATGACAGCTATGGTAGGATCCAGTGGAGCTGGGAAAAGCACGGCACTGCAGCTCATTCAGCGATTCTATGACCCCAGTGAAGGCATGGTGACCTTGGATGGCCATGACATTCGCTCTCTTAACATTCAGTGGCTTAGAGCTCAGATCGGGATAGTGGAGCAAGAGCCTGTTTTGTTTTCCACCACCATTGCAGAAAATATTCGCTATGGCAGAGAAGATGCAACGATGGAAGATATAGTCCGAGCTGCCAAGGAAGCCAATGCCTATAGCTTCATCATGGACCTGCCACAGCAATTTGACACTCTTGTTGGAGAAGGAGGAGGTCAGATGAGTGGCGGCCAGAAACAAAGACTAGCCATTGCTAGAGCCCTTGTCCGAAACCCGAAGATCCTACTTTTGGACATGGCCACCTCGGCACTGGACAATGAGAGTGAAGCCATGGTGCAAGAGGCACTGAGTAAGGTTCAGCATGGGCACACAATCATTTCCGTCGCTCATCGCCTATCCACGGTTAGAGCTGCAGATGTCATTATTGGTTTTGAACGTGGTACAGCAGTGGAAAGAGGCACCCATGAAGAACTGTTGGAAAGGAAAGGAGTTTACTTCACTCTAATGACTTTGCAAAGAAAAGATGAAACTGAAGATACCTTACTTGAGAGAAAACAGACCTTTAGCAGAGGGAGCTACCAAGCTAGCTTAAGAGCTTCCATCCGGCAACGGTCCAAGTCTCAGCTTTCTTACCTGGGACCTGAACCTCCATTAGCACTTGTAGATCATAAGTCTACTTATGAAGAGGACAGAAAGGTCAGGTACCGATCGCTCATGGGGGGATGGAAGAAGTCTCTCCTGGAGACTACTGTATGCCCTTTAAGCGAAGATGAGTTTTCTAGGCCTTTATCTAGTATTATTTCACTAAGTCAAACTAAATGGGAGACTCCATTAAGACCTGATGGGAACTCTAAATTTTACATAATGTTTTACATGGTATTTTAA

Related Sequences

bmy_15949T0 Protein

Length: 835 aa      View alignments
>bmy_15949T0
MEGPTRRERNGYGWQHKALERVRKLCDSPQWSPLFLLASSISRSQHCWLWTAITMSDSVILLSMKKSGEDNHGFESDRSYDNDKKSKLEDKKKKGGSSQVGFFQLFRFSSKTDIWLMFVGSLCAFLHGVAYPGVLLIFGTMTDVSIEYDMELQELKIPGKACVNNTIVWTNGSLYQNVTNGTRCGFLDIESEMVKFASYYAGIAVAVLVTGYIQICFWVIAAARQIQKMRKLYFRRIMRMEIGWFDCNSVGELNTRFSDDINKINDAIADQMAIFIQRMTTSVCGFLLGFYRGWKLTLVIISVSPLIGIGAAIIGLSVSKFTDHELRAYAKAGAVADEVISSIPTVAAYGGEKKEVERYEKNLVFAQRWGIRKGIVMGFFTGFMWCLIFLCYALAFWYGSRLVLDDGEYTAGTLVQIFLSVIVGALNLGNASSCLEAFAAGRAAATSIFETMDRKPLIDCMSEDGYKLDRIKGEIEFHNVTFHYPSRPEVKILNNLSMVIKSGEMTAMVGSSGAGKSTALQLIQRFYDPSEGMVTLDGHDIRSLNIQWLRAQIGIVEQEPVLFSTTIAENIRYGREDATMEDIVRAAKEANAYSFIMDLPQQFDTLVGEGGGQMSGGQKQRLAIARALVRNPKILLLDMATSALDNESEAMVQEALSKVQHGHTIISVAHRLSTVRAADVIIGFERGTAVERGTHEELLERKGVYFTLMTLQRKDETEDTLLERKQTFSRGSYQASLRASIRQRSKSQLSYLGPEPPLALVDHKSTYEEDRKVRYRSLMGGWKKSLLETTVCPLSEDEFSRPLSSIISLSQTKWETPLRPDGNSKFYIMFYMVF*