Part of scaffold_1244 (Scaffold)

For more information consult the page for scaffold_1244 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.54340 ENSBTAG00000013766 (Cow)

Gene Details

interferon-inducible GTPase 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018295, Cow)

Protein Percentage 85.0%
cDNA percentage 88.44%
Ka/Ks Ratio 0.15531 (Ka = 0.0779, Ks = 0.5014)

IRGC  (Minke Whale)

Gene Details

immunity-related GTPase family, cinema

External Links

Gene match (Identifier: BACU002083, Minke Whale)

Protein Percentage 29.49%
cDNA percentage 47.77%
Ka/Ks Ratio 0.0348 (Ka = 0.7268, Ks = 20.8887)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 903 bp    Location:332676..331774   Strand:-
>bmy_15972
ATGCAGCCCTCGCCCTACCCGCACCCGCAGTTTCCAGAGGTGACCCTGTGGGACCTGCTGGGGGCCGGCTCTCCAGGCTGCCCGGCCGACAAGTACCTGAAGCAGGTGGACTTCGGCCGCTATGATTTCTTCCTGCTGGTCTTCCCCCGCCGCTGCGGCGCCGTGGAGACTCGCCTGGCCTCCGAGATCCTGCGCCGGGGCAAACAGTTCTACTTCGTGCGCACCGAGGTGGACGAGGACCTGGCGGCCACGCGCACCCAGCGACCCTCGGGCTTCAGCGAGGCGGCGGTCCTGCAGGAGATGCGCGAGCACGGCGCCGAGCGGCTGCGTGCGGCCGGCGTGAACGACCCGCGCGTCTTCCTCGTGTCCAACCTCTCGCCCGCGCGCTACGACTTCCCGCTGCTCGTGTCCACCTGGGAGCACGATCTGCCCGCGCCCCGTCGCCACGCCGGCCTGCTGTCGCTGCCCGACATCTCGCTGGAGGCCCTGCGGAAGAAGAAGGACACGCTGCAGGAGCAGGTGCTCAAGACGGCCCTGGTGTTGGGCGTCATCCAGGCTGTGCCCGGGCCCCGGCTGGCGGCCGCCTACGACGATGCACTGCTCATCCGCTCGCTGCGCGGCTACCACCGCGGCTTCGGCCTGGACGACGACTCGCTCGCCAAGCTGGCCGAGCAGGTGGGCAAACAGGCAGGCGACCTGCGCTCGGTCATCCTCTCCCCGCTGGCCAACGAGGTCTCGCCCGAGACTGTCTTGCGGCTCTACTCCCAGTCGTCCGACGGTGCCATGCGGGTAGCCCGGGCCTCTGAGAAGGGCATCCGCCTGTTCGGAACGCTGGTGGCCGGAGGGCATCAGCTTCGGCACCGTCTACACCATGCTCCGGGGCTGCCTCAACGAGATGGCTGA

Related Sequences

bmy_15972T0 Protein

Length: 301 aa      View alignments
>bmy_15972T0
MQPSPYPHPQFPEVTLWDLLGAGSPGCPADKYLKQVDFGRYDFFLLVFPRRCGAVETRLASEILRRGKQFYFVRTEVDEDLAATRTQRPSGFSEAAVLQEMREHGAERLRAAGVNDPRVFLVSNLSPARYDFPLLVSTWEHDLPAPRRHAGLLSLPDISLEALRKKKDTLQEQVLKTALVLGVIQAVPGPRLAAAYDDALLIRSLRGYHRGFGLDDDSLAKLAEQVGKQAGDLRSVILSPLANEVSPETVLRLYSQSSDGAMRVARASEKGIRLFGTLVAGGHQLRHRLHHAPGLPQRDG*