Part of scaffold_1244 (Scaffold)

For more information consult the page for scaffold_1244 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLAUR ENSTTRG00000006815 (Bottlenosed dolphin)

Gene Details

plasminogen activator, urokinase receptor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006446, Bottlenosed dolphin)

Protein Percentage 90.73%
cDNA percentage 95.43%
Ka/Ks Ratio 0.82045 (Ka = 0.0457, Ks = 0.0558)

PLAUR ENSBTAG00000013125 (Cow)

Gene Details

Urokinase plasminogen activator surface receptor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017446, Cow)

Protein Percentage 76.21%
cDNA percentage 84.95%
Ka/Ks Ratio 0.35657 (Ka = 0.1278, Ks = 0.3585)

PLAUR  (Minke Whale)

Gene Details

plasminogen activator, urokinase receptor

External Links

Gene match (Identifier: BACU002081, Minke Whale)

Protein Percentage 96.37%
cDNA percentage 97.72%
Ka/Ks Ratio 0.43008 (Ka = 0.0181, Ks = 0.0422)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 744 bp    Location:374019..384454   Strand:+
>bmy_15974
ATGAGCTATCGGACTGGCATGCAGATCATCACCCTGACAGAGGCCGTGTGTGGGTCAGACTTGTGCAACCAGCCCAGTCCTGGCCAGGTTTCTACCTTTCCCCGAAGCCGTTACCTCGAATGTTCTTCCTGTGCCTCGTCAGATCTGAGCTGTGAGAGGGGCTGGGACAAGACCCTGCAGTGCCGCAACCCTGGAGAACAGTGCCTGGAGGTGAGTCCAGGGGATGAGCGCCACTCCCGAGGCTGTGGCAACCTTCCTGGCTGCCCAGGCCCCACTGGCTTCCACAACAACCACACCTTCCACTTCCTGCGGTGCTGCAACACCACGAAATGCAATGGGGGCCCAGTCCTGGAGCTTCAAAACCTGCCACTGAACGGCTTCCAGTGTTACAGCTGTGAGGGGAACAGCACCCATGGATGTTCCTCCGAAGAGACTTCCCTCACTGACTGTCGAGGCCCCATGAATCAATGTCTGGAAGCCACTGGCACTAATGGACTGGGGAACCCAAGCTACACCATAAGAGGCTGTGCAACCCCCTCCTGGTGCCAAGGCCTCCATGTGGCTGAAGCTTTCCGCCTCACCCATCTCAACGTCTCTTGCTGTATTGGAAACGGCTGTAACCATCCAGCTCTGGTTACCCAGCCCCCCACGGGGGGTGCCCCCCTGCCTGGCCCTGCCCACCTCAGCCTCTTCGTCACCCTGCTTATGACTGCCAGACTGTGGGGAGGTACTTTACTCTGCATC

Related Sequences

bmy_15974T0 Protein

Length: 248 aa      View alignments
>bmy_15974T0
MSYRTGMQIITLTEAVCGSDLCNQPSPGQVSTFPRSRYLECSSCASSDLSCERGWDKTLQCRNPGEQCLEVSPGDERHSRGCGNLPGCPGPTGFHNNHTFHFLRCCNTTKCNGGPVLELQNLPLNGFQCYSCEGNSTHGCSSEETSLTDCRGPMNQCLEATGTNGLGNPSYTIRGCATPSWCQGLHVAEAFRLTHLNVSCCIGNGCNHPALVTQPPTGGAPLPGPAHLSLFVTLLMTARLWGGTLLCI