Sequence detailsbmy_15980 (Coding sequence)

Part of scaffold_1244 (SequenceType object (1))

For more information consult the page for scaffold_1244 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

XRCC1ENSTTRG00000014766 (Bottlenosed dolphin)

Gene Details

X-ray repair complementing defective repair in Chinese hamster cells 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014003, Bottlenosed dolphin)

Protein Percentage 90.26%
cDNA percentage 91.28%
Ka/Ks Ratio 0.42722 (Ka = 0.0737, Ks = 0.1724)

XRCC1ENSBTAG00000016268 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021640, Cow)

Protein Percentage 86.94%
cDNA percentage 88.44%
Ka/Ks Ratio 0.23129 (Ka = 0.0787, Ks = 0.3405)

Additional orthologs identified in other species via the OPTIC pipeline.

XRCC1 (Human)   Xrcc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1266 bp    Location:455575..466022   Strand:+
Raw sequence 
>bmy_15980
ATGGATGGGAGGAGAGGCGGGTTTGAACTGAGAGACAGTCACTTAGTCCTTCTGGTCACCTCGTCTTTCATGTCCCCTTCCGAGAGTCGCAGTGGCTCAAATTCCAACCGCGTTCGCATTTTTGGGCCCGACAAGTTGGTCCGGGCAACAGCAGAGAAGCGCTGGGACCGCGTCAAAATTGTCTGCAGCCAGCCCTACAGCAAGGTTTCACAGCCCCCCAGACAAAGAGGAGGCCGAGGTCTCATCTCAGTCGCAGCCAGTGACCCAGCAGGACCCAGCTATGCAGCTGCTACACTGCAGGCCTCCAGTGCCGCCTCCTCGGCCTCTCCGGCCTCCAAGACAGTAGGCAGCACCTCCAAGGTGAGATCATCGGACCCTGCACGGGGGGCGGCGCCAGGGAAGCCCCGAGGAGAAGGCGCTGAGCCCAGGGCCCCCCGCGCCGGCCCGCAGGAGCTGGGGAAGATCCTCCAGGGTGTGGTGGTGGTGCTGAGCGGCTTCCAGAACCCCTTCCGCTCGGAGCTCCGGGACAAGGCCCTGGAGCTGGGGGCCAAGTATCGGCCAGACTGGACTCCAGACAGCACCCACCTCATCTGCGCCTTTGCCAACACCCCCAAGTACAGCCAGGTCCTAGGCCTCGGAGGCCGAATCGTGCGGAAAGAGTGGGTGCTGGACTGTCACCGCATGCGGCGGCGGCTGCCCTCTCGGAGGTACCTCATGGCTGGGCCAGACTCGAGCAGCGAGGACGAGGGGGGCTCTCACGGCGGCAGCAGTGGGGATGAAGCCCCCAAGCCTCCCCGAAAGGACAATGGGACAGAAGATTCTGGGGACACCGAGGATGAGCTGAGAAGGGTGGCTGAGCAGAAGGGACAAAGGCCGCCCTCTGGCGAGGAGAATGGCAAGGACCCGTACGCAGGATCCACAGATGAGAACACGGACGATGAAGGTCCCCCGGAGTCTCCCAATCTGCCGATTCCCGAGCTCCCAGACTTTTTCCAGGGCAAACACTTCTTCCTGTACGGGGAGTTCCCGGGGGACGAGCGGCGGACGCTCAGCCGTTATGTCACAGCCTTCAACGGGGAGCTTGAGGACTATATGAGCGACCGGGTACAGTTTGTGATCACGGCACAGGAGTGGGACCCCAGCTTTGAGGAGGCCTTGATGGACAACCCCTCCTTGGTGTTCGTCCGTCCCCGGTGGATCTACAGTTGCAACGAGAAGCAGAAGTTACTTCCCCACCAGCTCTACGGGGTAGTGCCCCAGGCGTGA

Related Sequences

bmy_15980T0 SequenceType object (3)

Length: 422 aa      View alignments
>bmy_15980T0
MDGRRGGFELRDSHLVLLVTSSFMSPSESRSGSNSNRVRIFGPDKLVRATAEKRWDRVKIVCSQPYSKVSQPPRQRGGRGLISVAASDPAGPSYAAATLQASSAASSASPASKTVGSTSKVRSSDPARGAAPGKPRGEGAEPRAPRAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPDSSSEDEGGSHGGSSGDEAPKPPRKDNGTEDSGDTEDELRRVAEQKGQRPPSGEENGKDPYAGSTDENTDDEGPPESPNLPIPELPDFFQGKHFFLYGEFPGDERRTLSRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLVFVRPRWIYSCNEKQKLLPHQLYGVVPQA*