Sequence details bmy_15991 (Coding sequence)

Part of scaffold_1287 (Scaffold)

For more information consult the page for scaffold_1287 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DDX1 ENSTTRG00000005081 (Bottlenosed dolphin)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004807, Bottlenosed dolphin)

Protein Percentage 95.48%
cDNA percentage 95.73%
Ka/Ks Ratio 0.30496 (Ka = 0.0294, Ks = 0.0964)

DDX1 ENSBTAG00000009906 (Cow)

Gene Details

ATP-dependent RNA helicase DDX1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013075, Cow)

Protein Percentage 95.04%
cDNA percentage 91.53%
Ka/Ks Ratio 0.10653 (Ka = 0.0323, Ks = 0.3036)

DDX1  (Minke Whale)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 1

External Links

Gene match (Identifier: BACU010276, Minke Whale)

Protein Percentage 96.09%
cDNA percentage 96.29%
Ka/Ks Ratio 0.33094 (Ka = 0.0265, Ks = 0.08)

Additional orthologs identified in other species via the OPTIC pipeline.

DDX1 (Human)   Ddx1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1998 bp    Location:149272..182820   Strand:+
Raw sequence 
>bmy_15991
ATGGCGGCCTTCTCCGAGATGGGTGTTATGCCTGAAATTGCTCAAGCTGTGGAAGAGATGGATTGGCTTCTCCCAACTGATATCCAGGCTGAGTCCATCCCCCTGATCCTAGGAGGAGGTGATGTCCTCATGAATGTTTTAAATTATGTTTGTTTGGGGTTAACTTTTCTTGTTTTAATTTGCTTAGTGCTGAACAAATGGCAAATGAACCCATATGATAGAGGATCTGCTTTTGCAATTGGGTCAGATGGTCTTTGTTGTCAGAGCAGAGAAGTAAAGGAATGGCATGGATGTAGAGCTACTAAAGGATTAATGAAAGGGAAACACTACTATGAAGTATCGTGTCATGACCAAGGATTGTGCAGAGTTGGGTGGTCTTCTATGCAGGCTTCCCTAGACCTAGGTACTGACAAGTTTGGATTTGGCTTTGGTGGAACAGGAAAGAAATCTCACAATAAACAATTTGATAATTATGGAGAGGAATTCACTATGCATGATACCATTGGATGTTACCTAGATATGGATAAAGGGCATGTCAAATTCTCCAAAAATGGTAAGCTTTCTAGGGACCATTTTAATGCTGAACTAAAATTCAACTTCGGGGAAGAAGAATTTAAGTTTCCACCAAAAGATGGTTTTGTTGCCCTTTCCAAGGCACCGGATAGTTTCATTGTCAAATCACAGCACACAGGTAATGCTCAGGTGGCACAAACGAAGTTTCTCCCCAATGCTCCAAAAGCTCTCATTGTCGAACCTTCCCGAGAGCTGGCTGAACAAACTTTGAATAACGTCAAGCAGTTTAAGAAATATGTCGATAATCCTAAATTAAGGGAGCTTCTGATAATTGGAGGTGTTGCAGCACGGGATCAGCTCTCTGTTTTGGATAATGGGGATGGGCTTCTTTCTCAAGGTTACTCTGATTTTATAAATAGGATTCACAATCAGATTCCTCAGATTACCTCTGATGGAAAAAGACTTCAGGTGATTGTTTGCTCAGCCACTTTGCACTCTTTTGATGTGAAGAAACTGTCTGAGAAGATCATGCACTTTCCCACCTGGGTTGATCTGAAAGGAGAAGATTCTGTTCCAGATACTGTCCACCATGTTGTTGTCCCAGTGAATCCCAAAGCTGACAGACTCTGGGAAAGGCTTGGGAAAAACCACATTAGGACTGATGAAGTACATGCAAAAGATAATACAAGACCTGGTGCTAACGGTCCAGAGATGTGGTCTGAAGCTGTTAAAATCCTGAAGGGGGAGTATGCTGTCCGAGCCATCAAGGAACACAAGATGGACCAAGCAATTATTTTCTGTAGAACCAAAATCGACTGTGACAACTTGGAGCAGTATTTCATGCAACAGGGAGGAGGACCTGATAAAAAGGGGCACCAGTTCTCATGTGTTTGTCTTCATGGKGACAGAAAGCCTCATGAGAGGAAGCAAAACTTGGAAAGATTCAAGAAAGGAGATGTAAGATTCTTGATTTGCACAGATGTAGCCGCCAGAGGAATTGATATCCATGGTGTTCCTTATGTTATAAATGTCACCTTGCCTGATGAAAAGCAAAACTATGTCCATCGAATCGGCAGAGTAGGAAGAGCTGAAAGGATGGGGCTGGCCATTTCCCTGGTGGCAACAGAAAAAGAGAAGGTTTGGTACCACGTATGTAGCAGCCGTGGAAAAGGGTGTTACAACACAAGACTCAAGGAAGATGGTGGCTGTACCATATGGTACAATGAGATGCAGTTGCTGTCTGAGATAGAAGAACATCTGAACTGTACCATTTCTCAGGTTGAGCCAGATATAAAGGTACCAGTGGATGAATTTGATGGGAAAGTTACTTATGGTCAAAAAAGAACTACTGGTGGTGGAAACTATAAAGGCCATGTGGATATTTTGGCACCTACGGTTCAAGAGCTGGCTGCCCTTGAAAAGGAGGCACAGACGTCTTTCCTGCATCTTGGCTACCTTCCTAACCAGTTGTTCAGAACCTTCTGA

Related Sequences

bmy_15991T0 Protein

Length: 666 aa      View alignments
>bmy_15991T0
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMNVLNYVCLGLTFLVLICLVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDMDKGHVKFSKNGKLSRDHFNAELKFNFGEEEFKFPPKDGFVALSKAPDSFIVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLDNGDGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKADRLWERLGKNHIRTDEVHAKDNTRPGANGPEMWSEAVKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRTTGGGNYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF*