Part of scaffold_1291 (Scaffold)

For more information consult the page for scaffold_1291 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAM217A ENSTTRG00000012612 (Bottlenosed dolphin)

Gene Details

family with sequence similarity 217, member A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011965, Bottlenosed dolphin)

Protein Percentage 81.28%
cDNA percentage 87.24%
Ka/Ks Ratio 0.74748 (Ka = 0.0968, Ks = 0.1295)

C6ORF146 ENSBTAG00000002089 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002699, Cow)

Protein Percentage 69.6%
cDNA percentage 79.66%
Ka/Ks Ratio 0.54789 (Ka = 0.2036, Ks = 0.3716)

FAM217A  (Minke Whale)

Gene Details

family with sequence similarity 217, member A

External Links

Gene match (Identifier: BACU005117, Minke Whale)

Protein Percentage 81.68%
cDNA percentage 86.65%
Ka/Ks Ratio 0.70704 (Ka = 0.1364, Ks = 0.1929)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1524 bp    Location:524839..513862   Strand:-
>bmy_16003
ATGACGCTGAACTGCTCTGAAGGCCAGCAGCCCCGTGCAGGCCCTCTCTCCCGCGTTCTACGCTTTCTCCTGACCCGCTGTGGATGCGGAGCCGAAGTTCACGCGCTCTTTGAAATCAGCCTCGTGCCGTACCCTCAGCGTGCCTGTCCCACACCTGTGCAGGAGTGTGAGGAAACAGAGAAGCGGGACGGGGCAAGAAATGGCAAAATTAACAAGAACCATTTGGAAATTCCAGTAGAGCAACTCATGCTGGAACTTACTTTGTCAGAGCATGCTCCCAAAACAACACAGAATAGTAAACAAGGGATATTCCAGTTATGGAGTTATCCTCTCAACAAAGGAAGTGCCAYGGAGAACAGGGATTTCAAAAAATCTTCAATGGAAACTGGCTGTCATGTGACCAGTAATCGCATAAGGTTCTTCGCTGTGAACCACTCACTAACAAGTGCTTCAGTGGACAAGCCAGTTGGCTCCTACCCTGCCCTGCAGACGCCATTAAGTCACTGCTGGCCTTATGCTGATGGAGACTTCTTTAAGGACAGAAATGAGCCTCATATTAATTTATGCTCAACTCTAGGAAACAACAGTGGTGAACTTTTAACTGCGCCAAATTGGAATCTGAAGTATGGAAACAGCAGTGTGGAAGAAAATTTAACAGATGAAAGTGATTTATCAGAAAATGAAAAAGCAAACGATACTTTACTCAGCTATTTTAAAAAGATGGACCTGAACTTAAAGCCAGAAACAATAGAAAATGTTGAAGACTCTTTCACAGAAGAACCAAGTGAAGTATTTCCATATCCTGATTTTCTTCCCCCTCCTTTCAATACCCTGGACTTGCACAAATTAGCCATCTCAAAATCTGAAAATTGGAAAATGACAATGGAGTCCCTAGACAGCTCTCTGGAACATTTGGTAGCTCGTTTACTGGACATGGAGAGATTGCAGCGCACGACTATTCAAAGAGAACGGCCGAGACTGCAGACTWCCTTCTGTGCTCCCTTAGCCACCGAACGACCCTCTTCCTCCAAAGCTGTACCCAAAATGAGACAGCCCAAACCTCCCGACTCTGTGGGTCTTCAGACAACTTGTGTAGAGAAAAGTCACGAGGAAAGGAAAACCAGTTCTGGTTCTTGCAAGCTTGAATACAATGCTCCCAAGTGGAATTGCAGCCGTGCTGGGAAATACAAATGGAATTCTAGACCAGCTCTGAAAACCTCACCCACCACAAAACAGGTGATTGCAGCTTACGACAACTTTAAGAACCCCAAGGTCTCCATTTTAAACCCATGCCAAGAACTCTCAGCCAAGCCTGCTCCTGCCCAGACAACTCAGTTGCTGGTTAAAATGGTCTCAACCAGATGTCTGCCACCAAAGTCTCCTACACGAGTTTCACCTATACTTCTGTCTTTTCCTGAAAATCAGAGGGAAGAAATTAAGGCACCACCAAGGACCAGAAAGAAACTTTACCAAAAAGACATGGTACTGAACAGACCATTCTGTATTCAGAAGCTAAACTGTTAA

Related Sequences

bmy_16003T0 Protein

Length: 508 aa      View alignments
>bmy_16003T0
MTLNCSEGQQPRAGPLSRVLRFLLTRCGCGAEVHALFEISLVPYPQRACPTPVQECEETEKRDGARNGKINKNHLEIPVEQLMLELTLSEHAPKTTQNSKQGIFQLWSYPLNKGSAXENRDFKKSSMETGCHVTSNRIRFFAVNHSLTSASVDKPVGSYPALQTPLSHCWPYADGDFFKDRNEPHINLCSTLGNNSGELLTAPNWNLKYGNSSVEENLTDESDLSENEKANDTLLSYFKKMDLNLKPETIENVEDSFTEEPSEVFPYPDFLPPPFNTLDLHKLAISKSENWKMTMESLDSSLEHLVARLLDMERLQRTTIQRERPRLQTXFCAPLATERPSSSKAVPKMRQPKPPDSVGLQTTCVEKSHEERKTSSGSCKLEYNAPKWNCSRAGKYKWNSRPALKTSPTTKQVIAAYDNFKNPKVSILNPCQELSAKPAPAQTTQLLVKMVSTRCLPPKSPTRVSPILLSFPENQREEIKAPPRTRKKLYQKDMVLNRPFCIQKLNC*