Sequence detailsbmy_16009 (Coding sequence)

Part of scaffold_1237 (SequenceType object (1))

For more information consult the page for scaffold_1237 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC23A2ENSTTRG00000000537 (Bottlenosed dolphin)

Gene Details

solute carrier family 23 (nucleobase transporters), member 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000501, Bottlenosed dolphin)

Protein Percentage 86.64%
cDNA percentage 86.92%
Ka/Ks Ratio 0.45988 (Ka = 0.0407, Ks = 0.0884)

SLC23A2ENSBTAG00000032366 (Cow)

Gene Details

solute carrier family 23 member 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000039151, Cow)

Protein Percentage 94.78%
cDNA percentage 92.17%
Ka/Ks Ratio 0.18738 (Ka = 0.0405, Ks = 0.2159)

SLC23A2 (Minke Whale)

Gene Details

solute carrier family 23 (ascorbic acid transporter), member 2

External Links

Gene match (Identifier: BACU014758, Minke Whale)

Protein Percentage 99.68%
cDNA percentage 99.35%
Ka/Ks Ratio 0.09918 (Ka = 0.0017, Ks = 0.0173)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC23A2 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 1920 bp    Location:272197..339872   Strand:+
Raw sequence 
>bmy_16009
ATGGGAGGATCAGAAGGGGGACTCAAGCCATTGACTCTTTTACAAATGTTAACTGGCTTTGGGAAACAATTTTTCTCTGATAGGCTTCTTCAAAGGCCTGCACAAGTGGTGATCAATGGAGGTGCCACGTCCAGCGGTGAACAGGACAATGAAGACACCGAGCTCATGGCAATATACACGACAGAAAATGGCATCGCAGAAAAGAGCTCTCTCGCTGAGACCTTGGATAGCACGGGCAGTCTTGACCCCCAGAGATCGGACATGATTTACACCATAGAAGATGTTCCTCCCTGGTACCTGTGCATATTTCTGGGGTTGCAGCATTACCTGACGTGCTTCAGTGGCACCATCGCGGTGCCCTTTCTGCTGGCCGATGCCATGTGTGTGGGATATGACCAGTGGGCCACCAGCCAGCTCATCGGGACCATTTTCTTCTGTGTGGGAATCACAACTTTGCTGCAGACAACTTTTGGATGCAGGTTACCCCTGTTTCAGGCCAGTGCTTTTGCATTTCTGGCCCCTGCTCGAGCCATCCTGTCTTTAGATAAATGGAAATGTAACACCACAGATGTTTCGGTTGCCAATGGAACAACGGAGCTGTTACATACAGAACACATCTGGTATCCTCGGATACGTGAGATCCAGGGAGCCATCATCATGTCCTCATTGATAGAAGTGGTTATCGGCCTCCTAGGCCTGCCTGGGGCTCTGCTGAAATACATCGGGCCCCTGACCATCACACCCACGGTGGCCCTCATTGGCCTCTCTGGTTTCCAGGCAGCAGGAGAGAGAGCAGGGAAGCACTGGGGCATCGCCATGCTTATGCATTGCTTGCATAATATAGACATAACAGCCTTTAACCTAGATCATTTTCTTTCTCTCCTCAGGACAATTTTCCTAGTATTACTGTTTTCTCAATATGCCAGAAATGTTAAATTTCCTCTCCCAATTTACAAATCCAAGAAAGGATGGACTGCATACAAGTTACAGCTTTTCAAAATGTTCCCTATCATCCTGGCCATCCTTGTGTCCTGGCTGCTCTGCTTCATCTTCACAGTAACAGATGTCTTCCCTCCTGATAGCACGAAGTATGGCTTCTATGCTCGAACTGATGCCAGGCAGGGTGTGCTTCTGGTAGCCCCGTGGTTTAAGGTCCCATACCCATTTCAATGGGGACTGCCCACCATCTCTGCGGCTGGTGTCATCGGCATGCTCAGTGCGGTCGTTGCCAGTATTATCGAGTCTATCGGGGACTACTACGCCTGTGCAAGGCTGTCCTGTGCCCCACCGCCCCCCATCCATGCAATAAACAGGGGGATTTTCGTGGAGGGTCTCTCCTGTGTTCTCGATGGCATATTTGGTACTGGGAATGGCTCTACTTCATCCAGTCCCAACATTGGAGTTTTGGGAATTACTAAGGTTGGCAGTCGTCGGGTGATACAGTACGGCGCAGCACTCATGCTCGCATTAGGCATGATTGGAAAGTTCAGTGCCCTCTTCGCCTCGCTCCCGGATCCTGTGCTTGGCGCCCTCTTCTGTACTCTCTTTGGAATGATCACAGCTGTTGGACTCTCTAACCTGCAGTTCATTGATTTAAATTCTTCCCGGAACCTCTTTGTGCTTGGATTTTCAATCTTCTTTGGGCTTGTCCTTCCAAGTTACCTCAGACAGAACCCTCTCGTCACAGGTACTCCAGAGGAAAGGGGAATCAGGAAATGGAAGAAGGGCGTGGGCAAAGGGAGCAAGTCTCTTGATGGCATGGAATCCTACGACTTGCCATTTGGCATGAACACTATTAAAAAATACAGATGTTTCAGCTACTTACCCATCAGCCCAACCTTTGCAGGCTACACATGGAAAGGCCTCAGGAAGAGCGCTAACAGCCGGAGTTCAGATGAAGACTCGCAGGCCACAGTATAG

Related Sequences

bmy_16009T0 SequenceType object (3)

Length: 640 aa      View alignments
>bmy_16009T0
MGGSEGGLKPLTLLQMLTGFGKQFFSDRLLQRPAQVVINGGATSSGEQDNEDTELMAIYTTENGIAEKSSLAETLDSTGSLDPQRSDMIYTIEDVPPWYLCIFLGLQHYLTCFSGTIAVPFLLADAMCVGYDQWATSQLIGTIFFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILSLDKWKCNTTDVSVANGTTELLHTEHIWYPRIREIQGAIIMSSLIEVVIGLLGLPGALLKYIGPLTITPTVALIGLSGFQAAGERAGKHWGIAMLMHCLHNIDITAFNLDHFLSLLRTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKLQLFKMFPIILAILVSWLLCFIFTVTDVFPPDSTKYGFYARTDARQGVLLVAPWFKVPYPFQWGLPTISAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALMLALGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQNPLVTGTPEERGIRKWKKGVGKGSKSLDGMESYDLPFGMNTIKKYRCFSYLPISPTFAGYTWKGLRKSANSRSSDEDSQATV*