Part of scaffold_1237 (Scaffold)

For more information consult the page for scaffold_1237 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRNP ENSTTRG00000009101 (Bottlenosed dolphin)

Gene Details

Major prion protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008606, Bottlenosed dolphin)

Protein Percentage 97.59%
cDNA percentage 97.19%
Ka/Ks Ratio 0.13712 (Ka = 0.0113, Ks = 0.0825)

PRP ENSBTAG00000027937 (Cow)

Gene Details

Major prion protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043233, Cow)

Protein Percentage 93.95%
cDNA percentage 91.53%
Ka/Ks Ratio 0.11543 (Ka = 0.0335, Ks = 0.2901)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 750 bp    Location:480208..479459   Strand:-
>bmy_16013
ATGGTGAAAAGCCACATAGCCAATTGGATCCTGGTTCTCTTTGTGGCCACGTGCAGTGACATGGGCCTCTGCAAGAAGCGACCAAAGCCTGGAGGAGGATGGAACACTGGGGGGAGCCGATACCCAGGACAGGGCAGTCCTGGAGGCAACCGCTATCCACCCCAGGGAGGGGGAGGCTGGGGTCAGCCCCACGGTGGTGGCTGGGGTCAGCCCCACGGTGGTGGCTGGGGTCAGCCCCATGGTGGCGGAGGCTGGGGTCAAGGTGGTGGCACCCACAATCAGTGGAAACCCAGTAAGCCGAAAACCAACATGAAGCATGTGGCAGGAGCTGCTGCAGCCGGGGCGGTAGTAGGGGGCCTTGGCGGCTACATGCTGGGGAGTGCCATGAGCAGGCCCCTTATACATTTTGGCAGTGACTATGAGGACCGTTACTATCGTGAAAACATGTACCGTTACCCCAGCCAGGTATACTACAGGCCAGTGGATCAGTATAACAGCCAGAACAGCTTTGTGCATGACTGCGTCAACATCACAGTCAAGCAGCACACGGTCACTACCACCACCACCAAGGGGGAAAACTTCACTGAGACGGACATCAAGATGATGGAGCGTGTGGTGGAGCAAATGTGCATCACCCAGTACCAGAGAGAATACCAGGCTTATTACCAAAGAGGAGCAAGTGTGATCCTCTTCTCCTCCCCTCCTGTGATCCTCCTCATCTCTTTGCTCATTTTCCTCATAGTGGGATGA

Related Sequences

bmy_16013T0 Protein

Length: 250 aa      View alignments
>bmy_16013T0
MVKSHIANWILVLFVATCSDMGLCKKRPKPGGGWNTGGSRYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGGWGQGGGTHNQWKPSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMYRYPSQVYYRPVDQYNSQNSFVHDCVNITVKQHTVTTTTTKGENFTETDIKMMERVVEQMCITQYQREYQAYYQRGASVILFSSPPVILLISLLIFLIVG*