Part of scaffold_1246 (Scaffold)

For more information consult the page for scaffold_1246 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM53 ENSTTRG00000005764 (Bottlenosed dolphin)

Gene Details

transmembrane protein 53

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005438, Bottlenosed dolphin)

Protein Percentage 97.28%
cDNA percentage 97.54%
Ka/Ks Ratio 0.20462 (Ka = 0.014, Ks = 0.0684)

TMEM53 ENSBTAG00000012372 (Cow)

Gene Details

Transmembrane protein 53

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016415, Cow)

Protein Percentage 93.88%
cDNA percentage 93.53%
Ka/Ks Ratio 0.10574 (Ka = 0.0272, Ks = 0.2575)

TMEM53  (Minke Whale)

Gene Details

transmembrane protein 53

External Links

Gene match (Identifier: BACU000339, Minke Whale)

Protein Percentage 99.08%
cDNA percentage 98.78%
Ka/Ks Ratio 0.10017 (Ka = 0.0043, Ks = 0.0424)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 837 bp    Location:41019..59166   Strand:+
>bmy_16024
ATGGCCTCGGCCCAGCTGGACTACACCATCGAGATCCCGGATCAGCCCTGCCGGAGCCAGGAGCACAGCCCCAACCAAGGTGGGAAGGAGGCGGGGACTCGACAGCCTTTGGTGATTCTCTTGGGCTGGGGTGGCTGCACGGACAAGAACCTGGCCAAATACAGCGCCATCTACCACAAAAGGGGCTGCATCGTGATCCGATACACAGCCCCCTGGCACATGGTCTTCTTCTCCGAGTCCCTGGGCATCCCTTCACTTCGTGTCTTGGCCCAGAAGCTGCTTGAGCTGCTCTTTGATTACGAGGTTGAGAAGGAGCCCCTGCTCTTCCACGTCTTCAGCAACGCCGGCGTCATGCTGTACCGATACGTGCTGGAGCTCCTGCAGACCCACCGGCGCTTCTGCCACCTGCGTGTGGTAGGCACCATCTTTGACAGCGGTCCTGGCGACGGCAACCTGCTGGGGGCTCTGAGGGCGCTGGCAGCCGTCCTGGAGCACCGGCCTGCCGCACTGCGCCTGCTGCTCCTGATGGCCTTTGCCCTGGTGGCAGTCCTGTTCCACGTCCTGCTGGCGCCGCTCACTTCCCTCTTCCACACCCACTTCTATGACAGGCTGCTCGACGCAGCCTCTCGCTGGCCCGAGCTCTACCTCTACTCCAGGGCCGACGAGGTGGTCCTGGCCAGGGACGTGGAGCGCATGGTGGAGGCACGCCTGGCGCACCAGGTCCTGGTGCACTCTGTGGACTTTGTGTCATCTGCACACGTCAGCCATCTCCGCGACTACCCTACTTACTACACGAGCCTTTGTGTCAACTTCATGCGCAGCTGTGTCCAGTGCTGA

Related Sequences

bmy_16024T0 Protein

Length: 279 aa      View alignments
>bmy_16024T0
MASAQLDYTIEIPDQPCRSQEHSPNQGGKEAGTRQPLVILLGWGGCTDKNLAKYSAIYHKRGCIVIRYTAPWHMVFFSESLGIPSLRVLAQKLLELLFDYEVEKEPLLFHVFSNAGVMLYRYVLELLQTHRRFCHLRVVGTIFDSGPGDGNLLGALRALAAVLEHRPAALRLLLLMAFALVAVLFHVLLAPLTSLFHTHFYDRLLDAASRWPELYLYSRADEVVLARDVERMVEARLAHQVLVHSVDFVSSAHVSHLRDYPTYYTSLCVNFMRSCVQC*