Part of scaffold_1304 (Scaffold)

For more information consult the page for scaffold_1304 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TUFT1 ENSTTRG00000011471 (Bottlenosed dolphin)

Gene Details

tuftelin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010879, Bottlenosed dolphin)

Protein Percentage 68.91%
cDNA percentage 70.97%
Ka/Ks Ratio 0.93277 (Ka = 0.0244, Ks = 0.0262)

TUFT1 ENSBTAG00000017566 (Cow)

Gene Details

tuftelin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043710, Cow)

Protein Percentage 88.27%
cDNA percentage 92.38%
Ka/Ks Ratio 0.41024 (Ka = 0.0611, Ks = 0.149)

TUFT1  (Minke Whale)

Gene Details

tuftelin 1

External Links

Gene match (Identifier: BACU007256, Minke Whale)

Protein Percentage 98.53%
cDNA percentage 99.12%
Ka/Ks Ratio 0.66378 (Ka = 0.0076, Ks = 0.0115)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1026 bp    Location:166890..188770   Strand:+
>bmy_16038
GGCAGCGTGGACATTCTCAGGCTGACTCTCCAGGGTGAACTGACAGGAGATGAACTTGAACGCATAGCCCAGAAGGCCGGCAGGAAGACCTATGCCATGGTGTCCGGCCGCTCAACTGGTCATTCTCTGGCCTCAGAACTGGTGGAGTCCAACGATGGACATGAAGAGATCATTAAGGCCAGGAACTGCCTGCAGAAGCTCCGGGAGGATATAAGTAGGAAGCTCGACAGAAATCCAGGAGATTCTCTCCATCAACAGGAGATACAGGTGGTGCTAGAAAAGCCAAATGGCTTTAGTCAAGGTCCCCTGACCCCACATAGTAGCCCACCCAAGATGGACACCTGTAGAGATGAAGATGTCGAGAGCTTGAGGAGGACCGTGCAGGACTTGCTTGTCAAGCTGCAGGAGGCTGAGCGGCAGCACCAGTCAGACCGTGTGGATTTTGAGGTCACACTCAGTCGGTACCAGAGAGAAGCAGAACAGAATCGGGTGGCCCTTCAGAGAGCAGAGGACAGAGTGGAGCAGAAGGAGGCGGAAGTCGGGGAGCTGCAGAGATGCTTTGTGGGAATGGAGACGGAGCATCAGGCCTTACTGGCGAAGGTCAGGGAAGGGGAGACAGCTCTGGAGGAACTTCGGAGCAAGAAGGTTGACTGCCGAGCAGAACAAGAAAAAGCTGCTAACCTGGAAAAGGAAGTGGCTGGGTTGCGGGAGAAGATCCACCACTTGGATGACATGCTTAAGAGCCAGCAGCGGAAAGTCCGGCAAATGATAGAGCAGCTCCAGAATTCAAAAGCTGTGATACAGTCAAAGGACACTGCCATCCAGGAGCTCAAGGAGAAAATTGCCTACCTGGAAGCCGAGAATTTAGAGATGCACGACCGGATGGAACACCTGATAGAGAAACAAATCAGTCATGGCAACTTCAGCATCCAGAACCGGACCAAGACTGAGAACCTGGGCAGCGTTAGGATCGCCAAGCCCCCCAGCCTAAAGCCCATGCCTCTCATCCGAGTGGTGGAAACATGA

Related Sequences

bmy_16038T0 Protein

Length: 342 aa      View alignments
>bmy_16038T0
GSVDILRLTLQGELTGDELERIAQKAGRKTYAMVSGRSTGHSLASELVESNDGHEEIIKARNCLQKLREDISRKLDRNPGDSLHQQEIQVVLEKPNGFSQGPLTPHSSPPKMDTCRDEDVESLRRTVQDLLVKLQEAERQHQSDRVDFEVTLSRYQREAEQNRVALQRAEDRVEQKEAEVGELQRCFVGMETEHQALLAKVREGETALEELRSKKVDCRAEQEKAANLEKEVAGLREKIHHLDDMLKSQQRKVRQMIEQLQNSKAVIQSKDTAIQELKEKIAYLEAENLEMHDRMEHLIEKQISHGNFSIQNRTKTENLGSVRIAKPPSLKPMPLIRVVET*