Sequence details bmy_16042 (Coding sequence)

Part of scaffold_1254 (Scaffold)

For more information consult the page for scaffold_1254 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PREX2  (Minke Whale)

Gene Details

phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2

External Links

Gene match (Identifier: BACU011126, Minke Whale)

Protein Percentage 91.12%
cDNA percentage 93.18%
Ka/Ks Ratio 0.66663 (Ka = 0.0654, Ks = 0.0982)

Additional orthologs identified in other species via the OPTIC pipeline.

PREX2 (Cow)  

Genome Location

Sequence Coding sequence

Length: 1590 bp    Location:103048..73579   Strand:-
Raw sequence 
>bmy_16042
ATGTTTGAATTATCACTGCATTCAACTGCTTTTTCTTTCATCTTTCATCTACAGTTTTCTCGTGTACTAAAGAATAGAGCCTGGCCCACCTTTAAACAGGCCAAATCTAAAATCTCTCCACTGCACAGCAGTGATTTCTGTCCCACCAACTGCCATGTCAATGTGATGGAAGTTTCTTATCCCAAAACATCAACGTACCTGGGGAGTGCATTTGGTGTTCAGTTGGATAGCAGGAAGCATAATTCTCATGATAAAGAAAATAAATCGGAACAAGGAAAACTAAGCCCTATGGTGTACATTCAACATACGATTACAACCATGGCGGCCCCTTCAGGTCTGTCTCTGGGGCAGCAAGATGGGCACGGTCTCCGGTATTTGTTGAAAGAAGACGACTTAGAAACCCAAGATATCTATCAGAAACTGCTGGGCAAACTTCAGACTGCACTGAAGGAGGTGGAGATGTGTGTTTGTCAAACAGATGACCTTCTGTCTTCAATAACATATTCTCCTAAATTAGAACGTAAGGCATCAGAGTCCGTAGTCCCAACAGACAGTGACAACGAGAAGGGAGAGAGAAACAGCAAACGCGTCTGTTTTAACATGGCAGGCGATGAGCAGGAAGATTCAGGTCACGACACCATCAGCAACAGAGACTCTTACAGCGACTGCAACAGCAATAGGAATTCCATCACCTCCTTCACCAGCATCTGCAGTAGCCAGTGCAGCTCGTATTTTCACAGCGATGAAATGGACTCAGGTGATGAGCTTCCCGTAAATGTTCGCATTTCTCGTGATAAACAGGACAAGATACACAGTTGCCTTGAGCATCTTTTCAGCCAGGTGGATTCCATTACCAATCTCCTGAAAGGCCAAGCTGTTGTGAGGGCCTTTGAGCAAACCAAGTACCTGACGCCAGGTCGAGGGTTACAAGAGTTTCAGCAGGAAATGGAACCAAAGCTGAGTTGTCCAAAAAGGTTAAGGCTTCACATCAAGCAAGATCCTTGGAATCTTCCCAGCAGTGTCCGGAATCTTGCTCAGAACATCAGAAAATTTGTTGAAGAGGTAAAGTGTAGGATACTCCTGGCTCTTCTTGAATATTCAGACAGTGAGACACAGCTCCGAAGAGACATGGTTTTCTGCCAGAGTCTCGTGGCCACAGTCTGTGCCTTCTCCGAGCAGCTCATGGCCGCCTTAAACCAGATGTTCGACAACAGCAAGGAAAATGAGATGGAAACTTGGGAAGCCAGCAGAAGGTGGCTGGACCAGATAGCGAATGCAGGAGTTCTTTTTCACTTTCAGTCACTTCTGTCACCAAACTTGACAGATGAACAAGCCATGCTAGAAGATACACTGGTTGCACTATTTGATTTGGAAAAGGTTTCTTTTTACTTTAAACCGTCAGAAGAGGAACCACTGGTTGCAAATGTTCCTCTTACTTATCAAGCTGAAGGAAGCCGGCAAGCTCTGAAAGTTTACTTCTACATCGATAGTTACCATTTTGAACAACTGCCTCAAAGGTTGAAAAACGGAGGAGGGTTTAAAATTCATCCTGTTCTTTTTGCACAAGTTGTAACCATCCTTTTTTTTCAT

Related Sequences

bmy_16042T0 Protein

Length: 530 aa      
>bmy_16042T0
MFELSLHSTAFSFIFHLQFSRVLKNRAWPTFKQAKSKISPLHSSDFCPTNCHVNVMEVSYPKTSTYLGSAFGVQLDSRKHNSHDKENKSEQGKLSPMVYIQHTITTMAAPSGLSLGQQDGHGLRYLLKEDDLETQDIYQKLLGKLQTALKEVEMCVCQTDDLLSSITYSPKLERKASESVVPTDSDNEKGERNSKRVCFNMAGDEQEDSGHDTISNRDSYSDCNSNRNSITSFTSICSSQCSSYFHSDEMDSGDELPVNVRISRDKQDKIHSCLEHLFSQVDSITNLLKGQAVVRAFEQTKYLTPGRGLQEFQQEMEPKLSCPKRLRLHIKQDPWNLPSSVRNLAQNIRKFVEEVKCRILLALLEYSDSETQLRRDMVFCQSLVATVCAFSEQLMAALNQMFDNSKENEMETWEASRRWLDQIANAGVLFHFQSLLSPNLTDEQAMLEDTLVALFDLEKVSFYFKPSEEEPLVANVPLTYQAEGSRQALKVYFYIDSYHFEQLPQRLKNGGGFKIHPVLFAQVVTILFFH