Sequence details bmy_16046 (Coding sequence)

Part of scaffold_1282 (Scaffold)

For more information consult the page for scaffold_1282 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CSTF2T ENSTTRG00000003341 (Bottlenosed dolphin)

Gene Details

cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003127, Bottlenosed dolphin)

Protein Percentage 99.34%
cDNA percentage 97.92%
Ka/Ks Ratio 0.05365 (Ka = 0.0032, Ks = 0.0602)

CSTF2T ENSBTAG00000018406 (Cow)

Gene Details

cleavage stimulation factor subunit 2 tau variant

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054873, Cow)

Protein Percentage 96.36%
cDNA percentage 92.83%
Ka/Ks Ratio 0.07575 (Ka = 0.0179, Ks = 0.236)

CSTF2T  (Minke Whale)

Gene Details

cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant

External Links

Gene match (Identifier: BACU009896, Minke Whale)

Protein Percentage 99.52%
cDNA percentage 97.51%
Ka/Ks Ratio 0.02247 (Ka = 0.0016, Ks = 0.071)

Additional orthologs identified in other species via the OPTIC pipeline.

CSTF2T (Human)   Cstf2t (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1926 bp    Location:298342..296417   Strand:-
Raw sequence 
>bmy_16046
ATGTCTAGTTTGACGGTGAGAGACCCGGCAATGGATCGATCACTGCGTTCCGTGTTCGTGGGGAACATTCCGTATGAGGCAACTGAGGAGCAGTTGAAGGACATTTTCTCCGAGGTTGGTTCCGTTGTGAGTTTCCGGCTGGTATACGATAGAGAGACGGGAAAACCTAAGGGTTATGGCTTCTGCGAGTACCAAGACCAGGAGACCGCGCTTAGTGCCATGCGGAACCTTAACGGGCGGGAGTTCAGCGGGAGAGCGCTTCGGGTGGACAATGCTGCCAGTGAAAAGAACAAGGAGGAGTTAAAGAGCCTAGGGCCTGCAGCGCCCATCATTGACTCACCCTATGGGGACCCCATCGATCCAGAAGATGCCCCTGAGTCAATTACCAGAGCAGTCGCTAGCCTTCCCCCGGAGCAGATGTTTGAGCTGATGAAGCAGATGAAGCTCTGTGTCCAAAACAGTCACCAGGAAGCTCGAAATATGTTACTTCAAAACCCACAGCTGGCTTACGCGCTGTTGCAGGCGCAAGTAGTGATGAGAATCATGGATCCAGAGATTGCTCTGAAAATTCTGCATCGCAAAATACATGTCACACCACTCATCCCAGGCAAATCTCAATCCGTTTCTGGCCCTGCCCCTGGCCTTTGCCCAGGACCTAATGTTCTGCTGAACCAGCAGAATCCTCCAGCCCCTCAGCCTCAGCATTTGGCCAGAAGACCTGTGAAAGACATCCCTCCWCTGATGCAGACCCCTATCCAGGGTGGAATTCCAGCCCCGGGCCCAATTCCAGCTGCAGTTGCTGGCCCTGGCCCTGGCCCTGGCCCCTTAACTCCTGGTGGAGCAATGCAGCCCCAAGTTGGAATACCAGGGGTTGGTCCGGTGCCCTTAGAGCGGGGGCAGGTGCAGATATCAGATCCTAGAGCTCCTATGTCTCGTGGACCCATGACTGCTGGTGGCCTACCTCCTCGAGGACTGTTAGGGGATGCTCCAAATGACCCACGTGGAGGAACTTTGCTTTCAGTCACTGGAGAAGTAGAGCCCAGAGGCTATCTTGGCCCACCACATCAGGGTCCTCCAATGCACCATGCGTCTGGTCATGACAGCCGGGGCCCTTCCTCACATGACATGAGGGGAGGGCCATTAGCAGATCCCAGAATGCTCATTGGAGAACCCAGAGGACCCATGATAGATCAAAGGGGTCTACCTATGGATGGTAGAGGTAGCAGAGATTCTCGAGGGATGGAGACTCGAGCCATGGAAACTGAGGTCTTGGAGACACGAGTAATGGAGAGAAGAGGAATGGAAACCTGTGCAATGGAAGCCAGAGGGATGGAAGCGAGAGGCATGGATGCAAGAGGAATGGAGATGAGGGGCCCTGGCCCCAGCTCAAGAGGCCCTATGACTGGGGGAATTCAGGGTGCTGGTCCTATTAATATGGGGGCAGGTGGTCCTCAGGGACCCAGACAGGTCCCAAGCATTTCAGGGGTGGGAAATCCTGGAGCTGGCATGCAGGGGGCAGGTATGCAAGGAGCAGGCATGCAGGGGGCAGGTATGCAAGGAGCAGGCATGCAGGGGGCGGGCATGCAAGGCGCAGGCATGCAGGGAGCGGGCATGCAGGGAGCGGGCATGCAGGGGGCAGGCATGCAGGGAGCAGGCATGCAGGGGGCAGGCATGCAGGGAGCAGGCATGCAAGGGGCAGGCATGCAAGGGGCAGGCATGCAAGGGGCAGGCAAGCAAGGTGGAGGCCAGCCTAGCAGTTTTAGTCCTGGGCAGAGCCAGGTCACCCCACAGGATCAAGAAAAGGCAGCTTTGATCATGCAGGTTCTTCAACTGACTGCAGATCAGATTGCCATGCTGCCTCCTGAGCAAAGGCAGAGTATYCTGATTTTAAAGGAACAAATCCAGAAATCTACTGGAGCTTCTTGA

Related Sequences

bmy_16046T0 Protein

Length: 642 aa      View alignments
>bmy_16046T0
MSSLTVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPIDPEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRKIHVTPLIPGKSQSVSGPAPGLCPGPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQTPIQGGIPAPGPIPAAVAGPGPGPGPLTPGGAMQPQVGIPGVGPVPLERGQVQISDPRAPMSRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHASGHDSRGPSSHDMRGGPLADPRMLIGEPRGPMIDQRGLPMDGRGSRDSRGMETRAMETEVLETRVMERRGMETCAMEARGMEARGMDARGMEMRGPGPSSRGPMTGGIQGAGPINMGAGGPQGPRQVPSISGVGNPGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS*