Sequence detailsbmy_16057 (Coding sequence)

Part of scaffold_1326 (SequenceType object (1))

For more information consult the page for scaffold_1326 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX1ENSBTAG00000002014 (Cow)

Gene Details

sorting nexin-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042318, Cow)

Protein Percentage 91.71%
cDNA percentage 91.17%
Ka/Ks Ratio 0.27432 (Ka = 0.0599, Ks = 0.2182)

Additional orthologs identified in other species via the OPTIC pipeline.

SNX1 (Human)   Snx1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1305 bp    Location:463506..485712   Strand:+
Raw sequence 
>bmy_16057
ATGGGATCCATGAGGAACAAGACCAAGAGCCACAGGATCTCTTTGCAGGCAAATGCCACAGTGGAGCTATCCCTGGACAGCACACAAAATAATCAGAAGAAGGTGCCAGCCAAAACACTCATTTCTCTTCCTCCGCAGGAGGCCACAAATTCTTCTAAGCCCCAGCCAAGCTATGAGGAGCTAGAGGAAGAAGAACAGGAAGACCAATTTGACTTGACAGTTGGTATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCCTATGTGGCCTACAAAGTTACAACACAGACGAACTTACCAATGTTCAGAAGTAAACAGTTTGCAGTGAAAAGAAGATTTAGTGACTTTCTGGGTCTTTATGAGAAGCTTTCAGAGAAACACTCCCAGAATGGCTTTATCGTCCCTCCTCCCCCGGAGAAGAGCCTAATAGGAATGACAAAAGTAAAAGTTGGGAAGGAAGATTCTTCTTCTGCAGAATTTCTTGAAAAACGGAGGGCTGCTCTAGAAAGGTACCTTCAGAGGATTGTGAATCATCCTACCATGTTACAGGACCCTGATGTCAGGGAGTTCTTGGAAAAAGAAGAGCTGCCACGCGCCGTGGGTACCCAGACATTCAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCAGTCAGCAAAATGACCATCAAGATGAATGAATCAGACATTGTGAGTAGCCCTGTGCCTCTCAGCTTTCCCTACCCCCTCAGGCTTATGGAGCTAGCGCTGAACACATCCCAGTTTGCAAAGAGTCTCGCCATGCTCGGGAGCTCTGAAGACAACACAGCATTGTCACGGGCACTCTCCCAGCTGGCTGAGGTGGAAGAAAAGATCGAGCAGCTCCACCAGGAACAGGCCAACAATGACTTCTTCCTCCTTGCTGAGCTCCTGAGTGACTATATTCGCCTCCTGGCCATAGTCCGCGCCGCCTTTGACCAGCGCATGAAGATGTGGCAGCGCTGGCAGGATGCTCAAGCCACACTGCAGAAGAAGCGGGAGGCTGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGACAAGCTACAACAGGCCAAGGATGAGATCGTAGAGTGGGAGTCTCGGGTGACTCAGTACGAAAGGGACTTTGAAAGGATTTCAGCTGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAATCCAAGGACTTCAAAAACCACGTGATCAAGTACCTTGAGACACTCCTGTATTCACAGCAGCAGCTGGCAAAGTACTGGGAAGCCTTCCTTCCTGAGGCAAAGGCCATCTCCTAA

Related Sequences

bmy_16057T0 SequenceType object (3)

Length: 435 aa      
>bmy_16057T0
MGSMRNKTKSHRISLQANATVELSLDSTQNNQKKVPAKTLISLPPQEATNSSKPQPSYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTNLPMFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQTFSGAGLLKMFNKATDAVSKMTIKMNESDIVSSPVPLSFPYPLRLMELALNTSQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKMWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEIVEWESRVTQYERDFERISAVVRKEVIRFEKEKSKDFKNHVIKYLETLLYSQQQLAKYWEAFLPEAKAIS*