Sequence detailsbmy_16058 (Coding sequence)

Part of scaffold_1326 (SequenceType object (1))

For more information consult the page for scaffold_1326 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX22ENSTTRG00000013288 (Bottlenosed dolphin)

Gene Details

sorting nexin 22

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012606, Bottlenosed dolphin)

Protein Percentage 80.83%
cDNA percentage 82.78%
Ka/Ks Ratio 0.37547 (Ka = 0.1605, Ks = 0.4276)

SNX22ENSBTAG00000016821 (Cow)

Gene Details

sorting nexin-22

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022377, Cow)

Protein Percentage 73.87%
cDNA percentage 77.78%
Ka/Ks Ratio 0.29083 (Ka = 0.2039, Ks = 0.7012)

SNX22 (Minke Whale)

Gene Details

sorting nexin 22

External Links

Gene match (Identifier: BACU001051, Minke Whale)

Protein Percentage 80.0%
cDNA percentage 82.5%
Ka/Ks Ratio 0.42274 (Ka = 0.1698, Ks = 0.4017)

Genome Location

Sequence SequenceType object (2)

Length: 363 bp    Location:497057..500496   Strand:+
Raw sequence 
>bmy_16058
ATGCTGGAAGTTCGCATCCCGTCGGTGGGGCCCGAGGCCGAGGGGACCCGGCAGAGCCCCGAAAAAGGCCACATGGTGTTCCGAGTGGAGGTGCTGTGCCACGGGCGCAGACACACCGTGCAGAGGCGCTACAGCGAGTTCCACGCGCTGCACAAACGGATCAAGAAACTGTACAAAGTGCCCGACTTCCCCTCGAAACGCCTGCCCAACTGGAGGACCAGAGGACTGGAGCAGCGGCGGCAGAGCTTGGAGGCCTATATCCAGCACCCTGGGGGAGTTCCTGCCAGGCAACAGCAGGCAAGTCAAAGTCCCTGTCTGCACTGGGTCCCTGCTGCCCCCTCGTGGCCATATGCCAGGGCCTGA

Related Sequences

bmy_16058T0 SequenceType object (3)

Length: 121 aa      View alignments
>bmy_16058T0
MLEVRIPSVGPEAEGTRQSPEKGHMVFRVEVLCHGRRHTVQRRYSEFHALHKRIKKLYKVPDFPSKRLPNWRTRGLEQRRQSLEAYIQHPGGVPARQQQASQSPCLHWVPAAPSWPYARA*