Part of scaffold_1250 (Scaffold)

For more information consult the page for scaffold_1250 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

WNT5B ENSTTRG00000017067 (Bottlenosed dolphin)

Gene Details

wingless-type MMTV integration site family, member 5B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016180, Bottlenosed dolphin)

Protein Percentage 69.91%
cDNA percentage 69.71%
Ka/Ks Ratio 0.01667 (Ka = 0.0016, Ks = 0.0949)

WNT5B ENSBTAG00000001341 (Cow)

Gene Details

protein Wnt-5b precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001766, Cow)

Protein Percentage 97.87%
cDNA percentage 94.43%
Ka/Ks Ratio 0.009 (Ka = 0.0079, Ks = 0.8816)

WNT5B  (Minke Whale)

Gene Details

wingless-type MMTV integration site family, member 5B

External Links

Gene match (Identifier: BACU020531, Minke Whale)

Protein Percentage 73.85%
cDNA percentage 80.51%
Ka/Ks Ratio 0.2432 (Ka = 0.1828, Ks = 0.7517)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 990 bp    Location:232591..243092   Strand:+
>bmy_16063
ATGAACCCGGTGCAGAGGCCTGAGATGTTCATCATCGGGGCGCAGCCCGTGTGCAGCCAGCTCCCCGGGCTCTCCGCCGGCCAGCGGAAGCTGTGCCAGCTGTACCAGGAGCACATGGCCTACATAGGCGAGGGGGCCAGGACGGGCATCAGGGAGTGCCAGCACCAGTTCCGGCAGCGGCGGTGGAACTGCAGCACCGTGGACGATGCCTCCGTCTTTGGGAGAGTCATGCAGATAGGGAGCCGGGAGACGGCCTTCACCTACGCCGTGAGCGCGGCCGGGGTGGTCAACGCCATCAGCCGCGCCTGCCGCGAGGGGGAGCTGTCCACGTGCGGCTGCAGCCGGGCCGCGCGGCCCAAGGACCTGCCCCGGGACTGGCTGTGGGGCGGCTGCGGCGACAACGTGGACTACGGCTACCGCTTCGCCAAGGAGTTCGTGGACGCCCGCGAGCGCGAGAAGAACTTCGCCAAGGGCTCGGAGGAGCAGGGCCGCGTGCTCATGAACCTGCAGAACAACGAGGCCGGCCGGAGGGCTGTGTATAAGACGGCAGACGTGGCCTGCAAATGCCACGGCGTCTCGGGGTCCTGCAGCCTCAAGACCTGCTGGCTGCAGCTGGCGGAGTTCCGCAAGGTGGGGGACCAGCTGAAGGAGAAGTACGATAGCGCGGCTGCCATGCGCATCACCCGCCGGGGCAAGCTGGAGCTGGTCAACAGCCGCTTCAAGCAGCCCACCCCCGAGGACCTGGTCTACGTGGACCCCAGCCCGGACTACTGCCTGCGCGACCAGAGCACGGGCTCGCTGGGCACGCAGGGCCGCCTGTGCAACAAGACGTCCGAGGGCCTSGACGGCTGCGCGCTCATGTGCTGCGGCCGCGGCTACGACCAGTTCAAGAGCGTGCAGACCGAGCGCTGCCACTGCAAGTTCCACTGGTGCTGCTTCGTCCGCTGCAAGAAGTGCACGCAGGTCGTGGACCAGTTCGTCTGCAAGTAG

Related Sequences

bmy_16063T0 Protein

Length: 330 aa      View alignments
>bmy_16063T0
MNPVQRPEMFIIGAQPVCSQLPGLSAGQRKLCQLYQEHMAYIGEGARTGIRECQHQFRQRRWNCSTVDDASVFGRVMQIGSRETAFTYAVSAAGVVNAISRACREGELSTCGCSRAARPKDLPRDWLWGGCGDNVDYGYRFAKEFVDAREREKNFAKGSEEQGRVLMNLQNNEAGRRAVYKTADVACKCHGVSGSCSLKTCWLQLAEFRKVGDQLKEKYDSAAAMRITRRGKLELVNSRFKQPTPEDLVYVDPSPDYCLRDQSTGSLGTQGRLCNKTSEGLDGCALMCCGRGYDQFKSVQTERCHCKFHWCCFVRCKKCTQVVDQFVCK*