Part of scaffold_1250 (Scaffold)

For more information consult the page for scaffold_1250 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRTM2 ENSTTRG00000003016 (Bottlenosed dolphin)

Gene Details

leucine-rich repeats and transmembrane domains 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002830, Bottlenosed dolphin)

Protein Percentage 89.46%
cDNA percentage 92.79%
Ka/Ks Ratio 0.18083 (Ka = 0.0508, Ks = 0.2807)

LRTM2 ENSBTAG00000021995 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029331, Cow)

Protein Percentage 86.9%
cDNA percentage 89.39%
Ka/Ks Ratio 0.10456 (Ka = 0.064, Ks = 0.6123)

LRTM2  (Minke Whale)

Gene Details

leucine-rich repeats and transmembrane domains 2

External Links

Gene match (Identifier: BACU007558, Minke Whale)

Protein Percentage 94.59%
cDNA percentage 95.77%
Ka/Ks Ratio 0.17172 (Ka = 0.0266, Ks = 0.1551)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1446 bp    Location:356309..365655   Strand:+
>bmy_16067
ATGCAGCTCCAGGTGGCGGGGGGCGGCGCAGAGGGGAAGGAAGCAGAGCCGTTTTCTCTGGACAGAATCCTTCCATGGCAGTGGCCCTGGGAGAGGAAGATGGGGCGGCTCTCTGACATCCTCACATCCTCTGTCGCGTCAGCGTCTGTGGTGTCAGGGCGGGGGGCAGGCTCCCGAGGGGATCCACCGTGTGGGGACCCCGGGTGCCCGGCGCTGTCCGTCCACATGGACGTGCTGCGAGGGGTTAGTTCTGTTTTTACGTGGTCAGCAAGCGCTAAGGCACCGCTCGTGGTTGGACCAGAGGGGATCAGCGCAAGGCCGCGTGCTGGGAATTGGATGGGAGGGGAAGGCGGCGGGAGCTGGCGCCCCGCTGTCCTTCCATCCCCCGTCTGTCCCCCAGGGCTCACCTGCTGGATTGCCCTGTGCACGGCGGAGGCCCTCCCCGCCTGCCCCTTGCCCTGCACGTGTGACGGCCACGGCCTGCAGGTGGACTGCAGCGGCCGGGGCCTCACCGCGCTGCCCCCGGACCTGCCGGCCGCCACCCGCACCCTCCTGCTCCTGAACAACAGGCTCAGCTTCCTGCCCGGCGGGGCCTTCGCCAGCCTGTCGGGCCTGCAGCGGCTGGACCTCTCCAACAACTTCCTGGACGGGCTGCCGCGCACCGCCTTCGGGGAGCTGGCCAACCTGACGGAGCTGCAGCTGCGCAATAACAGCCTCCGCGCCCTGGACCCCGAGCTGCTGCGGCCCCTGCCGCGCCTGCGCCACCTCGACCTGTCCCTCAACGGCCTGGCCCGGCTCCCGCCCGGCCTCTTCGACGGGCTCCCCGCCCTGCGCTCCCTGTTCCTGCGTGCCAACCGCCTGCAGAGCCTGGACCGGCGGACCTTCGAGCCCCTGGCCGGCCTGCAGCTGCTGCAGGTGGGGGACAACCCCTGGGAGTGCGACTGCCACCTGCGGGACTTCAAGCACTGGCTAGAGTGGTTCTCCTACCGAGGGGGGCGCCTGGATCAGCTGACCTGCACCCTGCCCAAGGAGCTCAGGGGGAAGGACATGCGCGCGGTCCCCATGGAGATGTTCAACTACTGCTCCCAGCTGGATGGCCACAAGAGCTCAGCCGGGCTGGAGGTCCCCGGGCCGCCCTGCACCAAGGCCAGCCCGGAGCCTCCCAAGCCCAAGCCGGGCCCCGAGCCCGAGCCTGAGCCCAGCACCGCCTGCCCCCAGAAGCAGAGGCCGCGGCCCGTGAGCGTGCGGCGGGCCATCGGCACCGTGATCATCGCGGGGGTGGTCTGCGGTGTGGTCTGCATCATGATGGTGGTGGCCGCTGCCTACGGCTGCATCTACGCCTCCCTCATGGCCAAGTACCATCGGGAGCTCAAGAAGCGCCAGCCCCTGATGGGTGACCCGGAGGGCGAGCACGAGGACCGGAAGCAGATATCCTCTGTGGCCTGA

Related Sequences

bmy_16067T0 Protein

Length: 482 aa      View alignments
>bmy_16067T0
MQLQVAGGGAEGKEAEPFSLDRILPWQWPWERKMGRLSDILTSSVASASVVSGRGAGSRGDPPCGDPGCPALSVHMDVLRGVSSVFTWSASAKAPLVVGPEGISARPRAGNWMGGEGGGSWRPAVLPSPVCPPGLTCWIALCTAEALPACPLPCTCDGHGLQVDCSGRGLTALPPDLPAATRTLLLLNNRLSFLPGGAFASLSGLQRLDLSNNFLDGLPRTAFGELANLTELQLRNNSLRALDPELLRPLPRLRHLDLSLNGLARLPPGLFDGLPALRSLFLRANRLQSLDRRTFEPLAGLQLLQVGDNPWECDCHLRDFKHWLEWFSYRGGRLDQLTCTLPKELRGKDMRAVPMEMFNYCSQLDGHKSSAGLEVPGPPCTKASPEPPKPKPGPEPEPEPSTACPQKQRPRPVSVRRAIGTVIIAGVVCGVVCIMMVVAAAYGCIYASLMAKYHRELKKRQPLMGDPEGEHEDRKQISSVA*