Sequence detailsbmy_16071 (Coding sequence)

Part of scaffold_1256 (SequenceType object (1))

For more information consult the page for scaffold_1256 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THY1 (Minke Whale)

Gene Details

Thy-1 cell surface antigen

External Links

Gene match (Identifier: BACU017348, Minke Whale)

Protein Percentage 99.38%
cDNA percentage 99.17%
Ka/Ks Ratio 0.09756 (Ka = 0.0027, Ks = 0.028)

Additional orthologs identified in other species via the OPTIC pipeline.

THY1 (Cow)   THY1 (Human)   Thy1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 486 bp    Location:22331..17126   Strand:-
Raw sequence 
>bmy_16071
ATGAACCCTACCATTGGCATCACTCTCTTGCTGACAGTCTTACAGGTGGCCCGTGGGCAGAAGGTGACCAGCCTGACAGCCTGCCTCGTGGACCAGAGCCTTCGTCTAGACTGCCGCCATGAGAATACCACCAACCTGCCCATTCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCACCATTGGGGTCCCTGAGCATGCATACCGCTCCCGAACCAACTTCTTCAGCAAGTACAATCTCAAGGTCCTCTACCTGTCCGGCTTCACCACCAAGGATGAGGGGACCTACACATGCGCACTCCACCTCTCTGGCCAGACTCCCATCGTCTCCAACAGGAATGTCTCTGTGCTCAGAGATAAACTGGTCAAGTGTGGCGGCACAAGCCTGCTGACCCAGAACACCTCGTGGCTGCTGCCGCTTCTGTTCTCCCTGCCGCTCCTGCAGGCCATGGATTTCATCTCCCTGTGA

Related Sequences

bmy_16071T0 SequenceType object (3)

Length: 162 aa      
>bmy_16071T0
MNPTIGITLLLTVLQVARGQKVTSLTACLVDQSLRLDCRHENTTNLPIQYEFSLTRETKKHVLFGTIGVPEHAYRSRTNFFSKYNLKVLYLSGFTTKDEGTYTCALHLSGQTPIVSNRNVSVLRDKLVKCGGTSLLTQNTSWLLPLLFSLPLLQAMDFISL*