Sequence detailsbmy_16076 (Coding sequence)

Part of scaffold_1258 (SequenceType object (1))

For more information consult the page for scaffold_1258 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FNDC3AENSTTRG00000003995 (Bottlenosed dolphin)

Gene Details

fibronectin type III domain containing 3A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003793, Bottlenosed dolphin)

Protein Percentage 92.3%
cDNA percentage 93.09%
Ka/Ks Ratio 0.47277 (Ka = 0.0388, Ks = 0.0821)

FNDC3AENSBTAG00000020681 (Cow)

Gene Details

fibronectin type-III domain-containing protein 3A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000032499, Cow)

Protein Percentage 90.9%
cDNA percentage 91.31%
Ka/Ks Ratio 0.25553 (Ka = 0.0585, Ks = 0.2288)

FNDC3A (Minke Whale)

Gene Details

fibronectin type III domain containing 3A

External Links

Gene match (Identifier: BACU012203, Minke Whale)

Protein Percentage 93.96%
cDNA percentage 95.45%
Ka/Ks Ratio 0.68579 (Ka = 0.0437, Ks = 0.0638)

Additional orthologs identified in other species via the OPTIC pipeline.

FNDC3A (Human)   Fndc3a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3435 bp    Location:183067..115003   Strand:-
Raw sequence 
>bmy_16076
ATGCATCACGTGACTCGGTCAAAGGATCTTTTCCTCTCACAGCTTCGCAAAAAAAAAAAAAAAAAAACAGAAAGAAGCCGCCGCCGTTCTCCAATTAAAGCTGTTAACGTGTACTACGCTGTTTCCTTGTTGGATTTTCTTCTCTGCTGCTACTGTAAAAACAAAATGAGTGGTCCTGCTCAGGTTCCAATGATGTCCCCAAATGGTTCTGTGCCTCCTATTTACGTGCCTCCTGGATATGCCCCACAGGTTATTGAAGACAATGGAGTTCGAAGAGTTGTTGTGGTTCCTCAGGCACCAGAGTTTCATCCTGGTGGTCACACAGTCATCCATCGTTCCCCACATCCTCCTCTGCCTGGTTTCATTCCTGTACCAACCATGATGCCCCCTCCACCACGCCACATGTACTCACCAGTAACTGGAGCTGGAGACATGGCAACACAGTATATGACACAGTATCAGTCTTCACAAGTATATGGAGATGTAGATGCCCACTCTACACATGGAAGGTCCAACTTTAGAGATGAAAGATCTAGTAAGACATATGAACGTTTGCAGAAAAAATTAAAGGATCGCCAAGGAACACAGAAGGATAAAATGAACAGTCCGCCATCATCACCCCAGAAATGCCCTTCTCCCATAAATGAACATAATGGGCTTATGAAAGGGCAGAATGCTAGTGGTGTAAACATAGGATCAGCAAAGAACAAGTCAGGAAGGGGGAAAGGTGGTGCACAAATTGATACAGAAATAGAAGAAAAAGATGAAGAAACTAAAGCTTTTGAAGCACTTCTTTCCAACATTGTCAAACCAGTGGCCTCAGACATCCAGGCAAGGACAGTAGTACTTACCTGGTCACCTCCTTCCAGCCTCATTAATGGCGAAACAGATGAGACTACTGTACCAGAGCTCTATGGTTATGAAATTCTGGTCTCAAGTACTGGAAAAGATGGGAAATATAAAAGTGTATATGCAGGAGAAGAAACCAGTGTCACTTTAAATGATCTCAAACCAGCTACAGATTACCATGCAAAAGTCCAGGCAGAATACAATTCTATAAAGGGAACTCCTTCTGAAGCTGAAACCTTTACCACCTTGAGCTGTGAACCTGACATACCTAATCCACCAAGGATAGCCAATCGGACCAAAAATTCACTCACTTTGCAATGGAAGGCACCTAGTGACAATGGTTCTAAAATCCAAAATTTTATTTTAGAATGGGATGAGGGAAAAGGAAATGGAGAATTTTGTCAGTGTTACACGGGCTTACAAAAGCAATTTAAAATTACTAAACTGTCACCAGCAATGGGTTGTAAATTTAGACTATCAGCCAAAAATGACTATGGTCCAAGTGGTTTTAGTGAAGAAGTCTTATTTTACACCTCAGGCTGTGCCCCTTCTATGCCAGCAAGTCCTATATTAATTAAAGCTGGGGTTACTTGGTTATCCTTACAATGGAGTAAACCCTCAGGAACACCATCAGATGAAGGAATTTCTTATATTTTAGAGATGGAGGAAGAAACTTCAGGATATGGTTTTAAGCCTAAATATGATGGAGAAGACCTTGCTTACACAGTGAAAAATCTCAGACGTAGTACAAAGTATAAATTTAAGGTTATTGCTTATAACTCAGAAGGTAAAAGTAATCCAAGTGAAGTAGTTGAATTTACTACATGCCCTGATAAACCGGGAGTACCTGTAAAGCCCTCAGTTAAAGGAAAGATACATTCACATAGTTTTAAAATAACTTGGGAACTCTATTCCTTTTCTGTTGATAGTCAAGTATCTGAATCTTTACTTGTGCAGACTCCAGCTGTGCCTCCTGGCCCATGCCTCCCTCCCAGATTACAGGGTAGACCCAAAGCAAAAGAAATACAGTTACGATGGGGACCCCCTTTGGTCAGTGGTGGATCACCCATTTCTTGCTATGGTGTGGAAATGTCTCCTTTAGAAAGAGATGAACCCAGAGAAGTTTACCAAGGTTCTGAAGTGGAATGTACAGTGAGCAGCCTTCTTCCTGGAAAGACTTACAGCTTCAGACTGCGTGCAGCTAACAAAATGGGGTTTGGACCATTTTCAGAAAAATGTGATATTACTACAGCCCCTGGACCACCAGATCAGTGCAAGCCCCCTCAAGTTACATGGAGATCTGCAACTTGTGCACAAGTGAATTGGGAGGTCCCTTTGAGTAATGGAACTGATGTCACTGAATATCGATTGGAGTGGGGAGGAGTTGAAGGAAGTATGCAGATATGTTACTGTGGGCCCGGTCTCAGTTATGAATTAAAAGGACTTTCACCAGCAACTACCTATTATTGCAGAGTCCAGGCTCTGAGTATTGTGGGTGCAGGCCCTTTCAGTGAAATAGTAGCCTGTGTGACTCCACCATCAGTTCCTGGTATTGTGACTTGTCTTCAAGAAGTAAGTGATGATGATATAGAAAATCCCAACTATTCACCGTCTACATGCCTTGCCGTAAGCTGGGAAAAGCCTTGTGATCATGGTTCAGAAATCCTTGCCTACAGCATAGACTTTGGAGATAAACAGCCCTTGACTGTGGGAAAGGTTACAAGCTACATTCTAGATAGTTTGCAACCAGATACAACATACAGAATACGAATTCAAGCCTTGAATAGCCTTGGAGCTGGTCCTTTCAGCCACATGATAAAATTAAAAACTAAACCCCTCCCTCCTGATCCACCTCGTCTGGAATGTGTTGCCTTCAGCCACCAGAACCTTAAACTGAAGTGGGGAGAAGGAACCCCAAAGACATTGTCGACAGATTCTGTTCAGTACCACCTTCAGATGGAGGATAAGAATGGAAGGTTTATATCCCTGTACAGAGGCCCATGCCATACGTACAAAGTACAAAGACTTAATGAGTCGACATCTTATAAATTCTGTATTCAAGCTTGTAATGAAGCAGGGGAAGGTCCTCTTTCCCAAGAATATATTTTCACTACTCCAAAATCTGTCCCAGCTGCCCTGAAAGCCCCCAAAATAGAGAAAGTAAATGATCACATTTGTGAAATTACATGGGAGTGTTTACAGCCAATGAAAGGTGATCCAGTTATTTACAGTCTTCAAGTTATGGTGGGAAAAGATTCGGAATTCAAACAGATTTACAAAGGGCCTGACTCTTCATTCCGGTATTCAAGCCTTCAGCTGAACTGTGAATATCGTTTCCGTGTGTGTGCCATTCGCCAGTGCCAAGACCCTGTGGGGCATCAGGACCTCGTAGGCCCCTACAGCACAACAGTGCTCTTCATCTCTCAGAGGACTGAACCACCAGCCAGCACCAACAGAGACACTGTGGAAAGCACGAGGACCCGGCGGGCACTCAGTGACGAGCAGTGTGCAGCCGTCATCCTTGTGCTGTTTGCTTTCTTTTCCATTTTGATTGCCTTTATCATTCAGTACTTTGTAATCAAGTGA

Related Sequences

bmy_16076T0 SequenceType object (3)

Length: 1145 aa      View alignments
>bmy_16076T0
MHHVTRSKDLFLSQLRKKKKKKTERSRRRSPIKAVNVYYAVSLLDFLLCCYCKNKMSGPAQVPMMSPNGSVPPIYVPPGYAPQVIEDNGVRRVVVVPQAPEFHPGGHTVIHRSPHPPLPGFIPVPTMMPPPPRHMYSPVTGAGDMATQYMTQYQSSQVYGDVDAHSTHGRSNFRDERSSKTYERLQKKLKDRQGTQKDKMNSPPSSPQKCPSPINEHNGLMKGQNASGVNIGSAKNKSGRGKGGAQIDTEIEEKDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDETTVPELYGYEILVSSTGKDGKYKSVYAGEETSVTLNDLKPATDYHAKVQAEYNSIKGTPSEAETFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFILEWDEGKGNGEFCQCYTGLQKQFKITKLSPAMGCKFRLSAKNDYGPSGFSEEVLFYTSGCAPSMPASPILIKAGVTWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDKPGVPVKPSVKGKIHSHSFKITWELYSFSVDSQVSESLLVQTPAVPPGPCLPPRLQGRPKAKEIQLRWGPPLVSGGSPISCYGVEMSPLERDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGPPDQCKPPQVTWRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGPGLSYELKGLSPATTYYCRVQALSIVGAGPFSEIVACVTPPSVPGIVTCLQEVSDDDIENPNYSPSTCLAVSWEKPCDHGSEILAYSIDFGDKQPLTVGKVTSYILDSLQPDTTYRIRIQALNSLGAGPFSHMIKLKTKPLPPDPPRLECVAFSHQNLKLKWGEGTPKTLSTDSVQYHLQMEDKNGRFISLYRGPCHTYKVQRLNESTSYKFCIQACNEAGEGPLSQEYIFTTPKSVPAALKAPKIEKVNDHICEITWECLQPMKGDPVIYSLQVMVGKDSEFKQIYKGPDSSFRYSSLQLNCEYRFRVCAIRQCQDPVGHQDLVGPYSTTVLFISQRTEPPASTNRDTVESTRTRRALSDEQCAAVILVLFAFFSILIAFIIQYFVIK*