Part of scaffold_1260 (Scaffold)

For more information consult the page for scaffold_1260 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FXR1 ENSTTRG00000014698 (Bottlenosed dolphin)

Gene Details

fragile X mental retardation, autosomal homolog 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013937, Bottlenosed dolphin)

Protein Percentage 99.64%
cDNA percentage 99.53%
Ka/Ks Ratio 0.087 (Ka = 0.0015, Ks = 0.0174)

FXR1 ENSBTAG00000016457 (Cow)

Gene Details

fragile X mental retardation syndrome-related protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021880, Cow)

Protein Percentage 99.65%
cDNA percentage 98.35%
Ka/Ks Ratio 0.02198 (Ka = 0.0016, Ks = 0.0709)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1959 bp    Location:253390..309861   Strand:+
>bmy_16092
ATGGCGGAGCTGACGGTGGAGGTTCGCGGCTCCAACGGGGCTTTCTACAAGGGATTTATCAAAGATGTTCATGAAGACTCCCTCACAGTTGTTTTTGAGAACAATTGGCAACCGGAACGCCAGGTTCCATTTAATGAAGTTAGATTACCACCACCACCTGATATAAAAAAAGAAATTAGTGAAGGAGATGAAGTAGAGGTGTATTCAAGAGCAAATGATCAAGAACCATGTGGATGGTGGTTGGCTAAAGTTCGAATGATGAAAGGAGAATTTTATGTCATTGAATATGCTGCTTGTGATGCCACTTACAATGAAATAGTCACATTTGAACGACTTCGGCCTGTCAATCAAAATAAAACTGTCAAAAAAAATACCTTCTTTAAATGCACAGTGGATGTTCCTGAGGATTTGAGAGAGGCGTGTGCTAATGAAAATGCACATAAAGATTTTAAGAAAGCAGTAGGAGCATGCAGAATTTTTTACCATCCAGAAACCACACAGCTAATGATACTGTCTGCCAGTGAAGCAACTGTGAAGAGAGTAAATATTTTGAGTGACATGCATTTGCGAAGTATTCGTACGAAGTTGATGCTTATGTCCAGAAATGAAGAGGCCACTAAGCATTTAGAAAGTGCTGATGCTGTAAAAAAGGCTAGAGGTTTTTTGGAATTTGTGGAGGATTTTATTCAGGTTCCTAGGAATCTTGTTGGAAAAGTAATTGGGAAGAATGGCAAAGTTATTCAAGAAATAGTAGACAAATCTGGTGTGGTTCGGGTGAGAATTGAAGGAGACAATGAAAATAAACTACCTAGAGAAGATGGGATGGTTCCATTTGTATTTGTTGGCACTAAAGAAAGCATTGGAAATGTGCAAGTTCTTTTAGAGTATCACATTGCTTATCTAAAGGAAGTAGAACAGCTAAGAATGGAACGCCTGCAGATTGATGAACAGCTACGACAGATTGGTATGGGTTTCAGACCTTCTTCCACCAGAGGGCCTGAAAAAGAGAAAGGATATGCCACTGATGAAAGTACCGTCTCTTCTGTACAAGGTTCTAGGTCTTATAGTGGAAGAGGCAGAGGTCGTCGGGGCCCTAATTACACCTCCGGTTATGGTACAAACTCTGAGCTGTCTAACCCATCTGAAACTGAATCTGAGCGTAAAGACGAGCTGAGTGATTGGTCATTGGCGGGAGAAGATGACCGAGAGAGCCGGCATCAGCGTGACAGCAGGAGACGCCCAGGAGGAAGAGGCAGAAGTGTTTCAGGGGGTCGAGGTCGTGGTGGACCACGTGGTGGCAAATCTTCCATCAGTTCTGGTAGTCTTTTATATACTATGTCAGAATCCTTTCTTGTGCTCAAAGATCCAGACAGCAATCCATACAGCTTACTTGATAATACAGAATCAGATCAGACTGCAGACACTGATGCCAGCGAATCTCATCACAGTACTAACCGTCGTAGGCGGTCTCGTAGACGAAGGACTGATGAAGATGCTGTTCTGATGGATGGGATGACTGAATCTGATACAGCTTCAGTTAATGAAAATGGGCTAGGTATGAATGTTTCAAACTACAAAAGTATTTTTCCTTTCATGGTGAACTTTGCAATTACAGATGATAGTGAAAAAAAACCCCAGCGACGCAATCGTAGCCGCAGGCGTCGTTTCAGGGGTCAGGCAGAAGATAGACAGCCAGTCACAGTTGCAGATTATATTTCTAGAGCTGAGTCTCAGAGCAGACAAAGAAACCTCCCAAGGGAAACTTTGGCTAAAAACAAGAAAGAAATGGCAAAAGATGTGATTGAAGAGCATGGTCCTTCAGAAAAGGCAATAAATGGCCCAACTAGTGCTTCTGGCGATGAAATTTCTAAGCTACAGCGTACTCCAGGAGAAGAAAAGATTAATACCTTAAAAGAAGAAAATACTCAAGAAGCAGCAGTCCTGAATGGTGTTTCATAA

Related Sequences

bmy_16092T0 Protein

Length: 653 aa      View alignments
>bmy_16092T0
MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEATKHLESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQIGMGFRPSSTRGPEKEKGYATDESTVSSVQGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSGSLLYTMSESFLVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLGMNVSNYKSIFPFMVNFAITDDSEKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDEISKLQRTPGEEKINTLKEENTQEAAVLNGVS*