Sequence detailsbmy_16100 (Coding sequence)

Part of scaffold_1295 (SequenceType object (1))

For more information consult the page for scaffold_1295 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPC2ENSTTRG00000008831 (Bottlenosed dolphin)

Gene Details

glypican 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008370, Bottlenosed dolphin)

Protein Percentage 92.87%
cDNA percentage 94.26%
Ka/Ks Ratio 0.45782 (Ka = 0.0472, Ks = 0.1031)

GPC2ENSBTAG00000008869 (Cow)

Gene Details

glypican-2 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011679, Cow)

Protein Percentage 88.69%
cDNA percentage 89.42%
Ka/Ks Ratio 0.25799 (Ka = 0.0707, Ks = 0.2739)

Additional orthologs identified in other species via the OPTIC pipeline.

GPC2 (Human)   Gpc2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1842 bp    Location:64376..58393   Strand:-
Raw sequence 
>bmy_16100
ATGTACGCGCTGCGATCTCTTCTGCTTCTCCTGTTGCCTCTGTGTCCCGGTCCTGGTCCTGGACCCGGTATCGAGGCAAAGGTCACCCGGAGTTGCACTGAGACCCGGCAGATCCTGGGGGCCCGGGGATATAGCTTAAGCCTACTCCCTCCCGCCCTGATCTCAGGTGAGCACCTCCGCATCTGTCCCCAGGAGTACACTTGCTGTTCCAGTGAGATAGAGCAGAAGCTGACCTGGGAGACTGAGGCCACCTTCCGAGGCCTGGTGGAAGAGAGCGGCTCCTTCTTGGTTCACACACTGGCTGCCCGGCACAGAAGATTTGATGAGGTTTTTCGGGAGATGCTCTCATCAGCCGAGCACTCCCTGTCCCTGCTCTTCCACCGCTCCTTCGGCCGCCTGTATGCCCAGCACACCCCCTTGTTCAGTGGCCTGTTCTCTCGGCTACGGGACTACTATGAGAGGTCCGGTGAGGGGTTAGATGATGCCTTGGTGGATTTCTGGGCTCAGCTCCTGGAGAAAATGTTCCCCCTGCTGCACCCACAGTACATCTTCTCCCCTGACTACCTGTTTTGCCTCACGCGCCTGGCCTCTTCTGCTGATGACTCTCTGAAGCCTTTTGGGGACTCACCCCGCCGCCTCCGCCTGCAGATAACCCGGGCCCTGGTGGCTGCCCGGGCGTTTATCCAGGGCCTGGAGACCGGAAGAGATGTGGTCAGCGAAACGCTTAAGATGCCGCTGTCCGAAGGCTGCAAGCGGGCTGTGATGCGTCTGACAGGCTGCCCCCTTTGTCGGGGGGTCCCCTCGCTGCCACCCTGCCGGGGCTTCTGCCTCAACGTGGCCCACGGCTGTATCGGCAGCCAGGGACTGGATCCTGACTGGGGGGCCTATCTGGATGGTCTCCTGTTCCTGGCCGAGAAGATCCAGGGCCCCTTTTCCTTTGAGCTAGCAGCACAGTCCATCGGGGTGAAGATCGCGGAGGGTTTGATGCATCTGCAGGAAAACAGCGTGGGGCTGTCAGCCCAGGAATGCGGGAGTCCCCAGCCGGCGCCGGCCCGCGCCCGCCGTGCCCCAGCCCCCCGGGAGGAGGTGGGCCGGCTCTGGTCGGCGGCGGCGGCGGAGGAGGAGCGGCCCACGACGGCTGCGGGCGCCAGCCTGCCCCGGCTGGTGAGTGGCGGGCGGCAGGCGGGGGCGCAGGTGCGGCGGGGGGCGGGGGGCGCGCGCACCAGCTCCTCCCGGGCTCTCTTTGCGTCCAGGTGTGGGAGCTCCGCGAGCGGCTGGGCCGGTGTGCGGGGACCCCCGCGTAGCTGCGGACCTCTCCCAGGAGGCGGCGCCCTGCTGGACCGGAGCTGGGCGGGGCCGGTGAGAGCCGGGCGGCGGCGGCGGCGGGCGGGCGAGGCGGACTCCGTGGGCGGGGCGGGGCGGGAGCCTCCGGGGCTGCTCTGCTCGCAGGCCGGGCAGATCGACAACCCAGAGCTGGATGCGGAAGCCTCGAGCCCCGACCTCCAGACGCGGAGGCGGCGGCTGCAGCTCCGGGCGGCCACGACCAGGATGAAGGCGGCCGCCCTGGGACGCGACCTGGAGCTGGAGGACTGGGAGGACGCTAGCGGCTCTGGAGAGGGACAGCACTATGCAGATGACTGGATGGCTGGGGCAGCAGCTGTGGCCCCCCCGGCCCGGCCTCCTCGCCCTCCTCGAAGGGATGGTGCTGGGGGCAAAGGAGGAGGTGTCATTATCCGCCACAGCCAAGACAAGAGCAGGACTGGAGGGACGTCTGTCAGTTTTCACACCCAACCCCTCCTCATTCTCTTCCTCTCAGCCCTGGCCCTGCTTGGACCTCGATAA

Related Sequences

bmy_16100T0 SequenceType object (3)

Length: 614 aa      View alignments
>bmy_16100T0
MYALRSLLLLLLPLCPGPGPGPGIEAKVTRSCTETRQILGARGYSLSLLPPALISGEHLRICPQEYTCCSSEIEQKLTWETEATFRGLVEESGSFLVHTLAARHRRFDEVFREMLSSAEHSLSLLFHRSFGRLYAQHTPLFSGLFSRLRDYYERSGEGLDDALVDFWAQLLEKMFPLLHPQYIFSPDYLFCLTRLASSADDSLKPFGDSPRRLRLQITRALVAARAFIQGLETGRDVVSETLKMPLSEGCKRAVMRLTGCPLCRGVPSLPPCRGFCLNVAHGCIGSQGLDPDWGAYLDGLLFLAEKIQGPFSFELAAQSIGVKIAEGLMHLQENSVGLSAQECGSPQPAPARARRAPAPREEVGRLWSAAAAEEERPTTAAGASLPRLVSGGRQAGAQVRRGAGGARTSSSRALFASRCGSSASGWAGVRGPPRSCGPLPGGGALLDRSWAGPVRAGRRRRRAGEADSVGGAGREPPGLLCSQAGQIDNPELDAEASSPDLQTRRRRLQLRAATTRMKAAALGRDLELEDWEDASGSGEGQHYADDWMAGAAAVAPPARPPRPPRRDGAGGKGGGVIIRHSQDKSRTGGTSVSFHTQPLLILFLSALALLGPR*