Sequence detailsbmy_16104 (Coding sequence)

Part of scaffold_1295 (SequenceType object (1))

For more information consult the page for scaffold_1295 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZCWPW1ENSTTRG00000008867 (Bottlenosed dolphin)

Gene Details

zinc finger, CW type with PWWP domain 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008410, Bottlenosed dolphin)

Protein Percentage 80.84%
cDNA percentage 83.27%
Ka/Ks Ratio 0.7603 (Ka = 0.0409, Ks = 0.0539)

ZCWPW1ENSBTAG00000001068 (Cow)

Gene Details

zinc finger CW-type PWWP domain protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001417, Cow)

Protein Percentage 83.09%
cDNA percentage 89.69%
Ka/Ks Ratio 0.78908 (Ka = 0.1066, Ks = 0.1351)

ZCWPW1 (Minke Whale)

Gene Details

zinc finger, CW type with PWWP domain 1

External Links

Gene match (Identifier: BACU012082, Minke Whale)

Protein Percentage 89.87%
cDNA percentage 92.53%
Ka/Ks Ratio 0.71155 (Ka = 0.0731, Ks = 0.1027)

Additional orthologs identified in other species via the OPTIC pipeline.

ZCWPW1 (Human)   Zcwpw1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1812 bp    Location:194702..165028   Strand:-
Raw sequence 
>bmy_16104
ATGGCGGAAATAACTCAGCTGCGCAGACGCAGAAGCCGATTCCAGTTGCGCATGCGCCTTAGCCCTGCGAGCACGCCGCCGGTGGGGGTGGAGATTTCAACATTCGTTATTGTGGAAGAAAATACTTCACCTGAAACAGAGGAGCAGAGACTTGACTTGTCAGACAAATGCGGGAAGGGACCAAAGAAAACCTTTGCCCCACCTGCACAAAAACTGCATAGCCTGATGCCCTGTAACCTTAACTCATCGAAGGAGGACATCCTGGGGATCAGTTCCCCAGAGGCAGAGACCAGGCCAAGCCTGCTAAAGGCCAGGTTAGAGAAGAAGAAGGAGAAAACAACCAAAGAGAATGGTACAGGCAGTGGCCAGGAGATAAAAGGAAAGGCTCAAGACAACAAGAAAGCAGAGAAGAAGGAAAAGGGAAAATCAACTCTTACCAATGCAGAATTTGAGGAGATTGTCCAGATTGTGCTACAGAAGTCCCTCCAGGAGTGCTTGGCGACTTCCTGTGCCCAGCCTACAAGATGTACCCAGTTAGACAAGGAACCAGGAATTGCTTCTTCTACTACTGATAATAATAATGCTGATGGAGAGAGGGTAGTGGTACCGCATATTCTAGAGATTTCAGCCTCTCAGGAAGGTGGAGTAATCCCTGAGATAAAGACATCTAAGCCAGGCCAGCCAGATCCTGCACCCTCTGAGAAGAAATTCAATAAACTCTCCTTAAGCAAAAGAAAGAAGGCCGCTCAAGATGAGAAAATGGAGAAAGCCCAAAGTGGACATGAGCACAAACAGAAAGACCAACTGAAGAAAACAGTTCAGGATCATTCTCAGATCAGGGACCAGCAAAAGGGAGAGGGAAGTGGTTTTGGTCAATGTCTAGTCTGGGTCCAGTGTTCCTCCCCAAACTGTGAGAAATGGAGGCGGCTACGTGGGAACATTGACCCCTCAGTCCTCCCAGATAATTGGTCCTGTGACCAGAATACAGATTTGGAGTATAATCACTGTGATATCCCTGAGGAGACCTGGACAGGGCATGAGAGTGAAGTGGCCTATGCCTCCTACATCCCAGGATCCATCATCTGGGCCAAGCAATACGGTTACCCCTGGTGGCCAGGCATGGTAGAATCTGATCCTGACCTGGGGGAATATTTTCTTTTTGCATCTCATCTTGATTCCCTGCCGAAAAAGTGCAGGAGTAAGGACTGCAGCCAGGAACTGGGGGCAGCCCTGATGATGGCTCAAGAGGCAGAGCAGATCAGTATTCAGGAGCGGGTTAACCTGTTTGGTTTCTGGAGCCGATACAGTGGATCTGACAACAGTGGGGAAGGAAAAGACGTAATGCTCTCTGGGGCTAACAGCTTAGATTCCTGCTTGGAGAAAGAAGAGGAAGAGTCAGAGTTGGAGGAAGAGGAGGAAGAGCAACAGAAAAAAGATCCAACTTTGCCTGGTCCCAAGCCAGCCAAAATTCAGACAAAAAAACCCAAGGCAAGAGGTGGAGCACATGGACGAGATGGGATCCCGCAAAGGAAGACAATGAAGAGATCTCTGGGAAATGAATCTGCAGCTCCACCTTTACCCATAATGGGAGGGAAAAAAGGGCATGGGAATTCAGAACCTGAGCAGCCAGGGCCTGCACCCCAGGAGCCACGGCCTCAGGAGGCTGGAAGTGTCCCCTCTGACAATGGAGCCTCCAGTGACCTGGACCTGGACCAACTCATGGCGGATGTTGGAGAAGAGCCGGAGCAGAGGGAGGAGCCACAGCACAGAGACGACACAGGGGAGCTCGCCGTGGCCTCCTGTGAGGAATAG

Related Sequences

bmy_16104T0 SequenceType object (3)

Length: 604 aa      View alignments
>bmy_16104T0
MAEITQLRRRRSRFQLRMRLSPASTPPVGVEISTFVIVEENTSPETEEQRLDLSDKCGKGPKKTFAPPAQKLHSLMPCNLNSSKEDILGISSPEAETRPSLLKARLEKKKEKTTKENGTGSGQEIKGKAQDNKKAEKKEKGKSTLTNAEFEEIVQIVLQKSLQECLATSCAQPTRCTQLDKEPGIASSTTDNNNADGERVVVPHILEISASQEGGVIPEIKTSKPGQPDPAPSEKKFNKLSLSKRKKAAQDEKMEKAQSGHEHKQKDQLKKTVQDHSQIRDQQKGEGSGFGQCLVWVQCSSPNCEKWRRLRGNIDPSVLPDNWSCDQNTDLEYNHCDIPEETWTGHESEVAYASYIPGSIIWAKQYGYPWWPGMVESDPDLGEYFLFASHLDSLPKKCRSKDCSQELGAALMMAQEAEQISIQERVNLFGFWSRYSGSDNSGEGKDVMLSGANSLDSCLEKEEEESELEEEEEEQQKKDPTLPGPKPAKIQTKKPKARGGAHGRDGIPQRKTMKRSLGNESAAPPLPIMGGKKGHGNSEPEQPGPAPQEPRPQEAGSVPSDNGASSDLDLDQLMADVGEEPEQREEPQHRDDTGELAVASCEE*