Part of scaffold_1295 (Scaffold)

For more information consult the page for scaffold_1295 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCOLCE ENSTTRG00000008901 (Bottlenosed dolphin)

Gene Details

procollagen C-endopeptidase enhancer

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008442, Bottlenosed dolphin)

Protein Percentage 76.73%
cDNA percentage 80.61%
Ka/Ks Ratio 0.47963 (Ka = 0.1896, Ks = 0.3953)

PCOLCE ENSBTAG00000020528 (Cow)

Gene Details

procollagen C-endopeptidase enhancer 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027347, Cow)

Protein Percentage 71.84%
cDNA percentage 76.87%
Ka/Ks Ratio 0.39681 (Ka = 0.2229, Ks = 0.5617)

PCOLCE  (Minke Whale)

Gene Details

procollagen C-endopeptidase enhancer

External Links

Gene match (Identifier: BACU012073, Minke Whale)

Protein Percentage 75.53%
cDNA percentage 80.35%
Ka/Ks Ratio 0.54027 (Ka = 0.2003, Ks = 0.3708)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1524 bp    Location:346058..351293   Strand:+
>bmy_16115
ATGCTGCCTACTACCACAGCCTCCCTCTTGGGGCCCCTCCTCACTGCCTGGGCTCTGCTGCTGCCTTTCACCCAGGGCCAGAGCCCCAACTACACCAGACCTGTGTTCCTGTGTGGAGGGGATGTGACTGGGGAGTCAGGTTACCTGGCAAGCGAGGGTTTCCCTAACCTCTACCCCGCCAATAAGGAGTGCGTCTGGACGATAACGACCTCAGGTCTTGTCCTCTGCACAAGCCACAAGCCCTCTGCTCTGCATCCTGATGGGGTCCCCTCTGCTTCAGGCCCAGTTTCTGTAGGAAATGCTTGGGGAAAAAGAGGGGCCCTGTGCCTGGTTGTGTCCCGCCTGACTTTGCAGGTCCCCGACCCTGTCCCCACCATCAGGTCCCTGAGGGCCAGACTGTGTCCCTCTCCTTCCGAGTCTTTGACCTGGAGCTGCACCCCTCCTGCCGTTATGACGCTCTGGAGAATGAGCCAGGACTTGACCTTGCGGACTACGGCGACCGAGGCCACTGCAGGGCCCCCGTGGATGTGTGTGCTCCTCCGAGCTGTGAGGGGGGCTGGAGGGCACGCAGGAGGTGAGCGAGGAGGCCGCGGCGAGCGTCCCGGAGGCGGCGGCCGGGCGGAGGAGGTGAGAGGCGAGAGCTCCGCTCCCTCGGCTGCCCGGGGTCCCGCCGCGCAGCCTCCGCCTCTGCCCCGCCGCCAGGTGATCTCACTGACCTTCGGGAAGTTTGACCTGGAGCCCGACTCCTACTGCCGCTACGATTCGGTCAGCGTGTTCAACGGCGCCGTGAGCGACGACGCCAAGCGGCTGGGGAAGTTCTGCGGCGACACAGCCCCGGGTCCCATCTCCTCCGAAGGGAACGAGCTCCTCGTCCAGTTCGTCTCGGACCTCAGCGTCACGGCCGACGGCTTCTCGGCCTCCTACAGGACCCTGCCGCGGGGCGCCACCGAAGGAGGGCCAGCCCGGAGCCCGGGGGAGGACGCCCGGCCGAGTCCCCCGCTCCTCGGCCCGGGCCCCAAGCCCGGAGCCGGGCCCAAAGTCAAGCCCGAAGTCCCACCTGAGGAGAAACCGAAGGCCGCGCCTAAGGCAGAGGCAACTCCGGTGGGCCCCGATGCACCCAGTGTCTCCTGCCCAAAACAGTGCCGGCGGACAGGCACCTTGCAGAGCCACTTCTGTAACAGCGACCTGGTGGTGACGGGAATGATGAAGTCCATGGTTCGGGGCCCAGGGGAGGGCCTCACAGTCACTGTCAATCTCACTGGTGTTTACAAAACCGGAGGCCTGGACCTGCCCTCTCCCCCCACTGACACCTCCCTGAAGTTTTATGTGCCCTGCAAGCAGTGCCCCCCCATGAAGAAAGGAATCAGTTATCTGCTGATGGGCCAGGTGGAAGAAAACAGAGGTCCGATCCTTCCTCCAGAGAGCTTCGTGGTTCTCTACCGGCCCACCCAGCACCAGATCCTCACCAACCTCAGCAAGAGGTGCCCCTCCAAGCCTGTTCAGGCTGCTGGATCCCAAGCCTGA

Related Sequences

bmy_16115T0 Protein

Length: 508 aa      View alignments
>bmy_16115T0
MLPTTTASLLGPLLTAWALLLPFTQGQSPNYTRPVFLCGGDVTGESGYLASEGFPNLYPANKECVWTITTSGLVLCTSHKPSALHPDGVPSASGPVSVGNAWGKRGALCLVVSRLTLQVPDPVPTIRSLRARLCPSPSESLTWSCTPPAVMTLWRMSQDLTLRTTATEATAGPPWMCVLLRAVRGAGGHAGGERGGRGERPGGGGRAEEVRGESSAPSAARGPAAQPPPLPRRQVISLTFGKFDLEPDSYCRYDSVSVFNGAVSDDAKRLGKFCGDTAPGPISSEGNELLVQFVSDLSVTADGFSASYRTLPRGATEGGPARSPGEDARPSPPLLGPGPKPGAGPKVKPEVPPEEKPKAAPKAEATPVGPDAPSVSCPKQCRRTGTLQSHFCNSDLVVTGMMKSMVRGPGEGLTVTVNLTGVYKTGGLDLPSPPTDTSLKFYVPCKQCPPMKKGISYLLMGQVEENRGPILPPESFVVLYRPTQHQILTNLSKRCPSKPVQAAGSQA*