Part of scaffold_1295 (Scaffold)

For more information consult the page for scaffold_1295 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POP7 ENSTTRG00000011012 (Bottlenosed dolphin)

Gene Details

processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010409, Bottlenosed dolphin)

Protein Percentage 98.57%
cDNA percentage 98.57%
Ka/Ks Ratio 0.1342 (Ka = 0.0061, Ks = 0.0458)

POP7 ENSBTAG00000026248 (Cow)

Gene Details

Ribonuclease P protein subunit p20

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000037068, Cow)

Protein Percentage 96.43%
cDNA percentage 93.1%
Ka/Ks Ratio 0.04593 (Ka = 0.0155, Ks = 0.3376)

POP7  (Minke Whale)

Gene Details

processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)

External Links

Gene match (Identifier: BACU019782, Minke Whale)

Protein Percentage 99.29%
cDNA percentage 99.05%
Ka/Ks Ratio 0.09564 (Ka = 0.0031, Ks = 0.0325)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 618 bp    Location:424727..425627   Strand:+
>bmy_16121
CCTTTTTCAGGAGCCTGGCGCCGGCTGGGTTCTAGCGCTCGAGCGTTCCGGCGGCGTTCACCTTTCCTTCTCTTGCCTTCTTGGGGCCTGCGGGTCGCGGGCAGCGCCCTCTATTCCGGCCGGTCGGCGCAACGCTTGAGTGCCCTGGCAGGGGAGCGGGCCGCGGCGCGTGGAGAGCACTGTGGACCGGAGAGAATGGCCGAAAACCGAGAGCCCCGCGGAGCCGTCGAGGCTGAGCTGGACCCGGTGGAGTACACCCTGCGGAAGCGGCTCCCCCATCGCCTGCCCCGGAGGCCCAATGACATTTATGTCAACATGAAGACTGACTTTAAGGCCCAGCTGGCCCGCTGCCAGAAACTGCTGGATGGAGGGGCTCGGGGTCAGAACGCATGCAATGAGATCTACATCCACGGCTTGGGCCTGGCCATCAACCGCGCCATAAACATTGCCTTACAGCTGCAGGCTGGCAGCTTCGGGTCCTTGCAGGTGGCTGCCAATACCTCCACCGTGGAGCTTGTCGATGAACTGGAACCAGAGATTGATACGCGAGAGCCGCTGACCCGGATCCGCAACAACTCGGCCATCCACATCCGTGTCTTCAGGGTCACACCCAAGTGA

Related Sequences

bmy_16121T0 Protein

Length: 206 aa      View alignments
>bmy_16121T0
PFSGAWRRLGSSARAFRRRSPFLLLPSWGLRVAGSALYSGRSAQRLSALAGERAAARGEHCGPERMAENREPRGAVEAELDPVEYTLRKRLPHRLPRRPNDIYVNMKTDFKAQLARCQKLLDGGARGQNACNEIYIHGLGLAINRAINIALQLQAGSFGSLQVAANTSTVELVDELEPEIDTREPLTRIRNNSAIHIRVFRVTPK*