Sequence detailsbmy_16126 (Coding sequence)

Part of scaffold_1295 (SequenceType object (1))

For more information consult the page for scaffold_1295 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SRRTENSTTRG00000011104 (Bottlenosed dolphin)

Gene Details

serrate RNA effector molecule homolog (Arabidopsis)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010529, Bottlenosed dolphin)

Protein Percentage 98.74%
cDNA percentage 97.44%
Ka/Ks Ratio 0.07947 (Ka = 0.0075, Ks = 0.0949)

BT.20029ENSBTAG00000001134 (Cow)

Gene Details

serrate RNA effector molecule homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001507, Cow)

Protein Percentage 98.05%
cDNA percentage 94.46%
Ka/Ks Ratio 0.03525 (Ka = 0.0086, Ks = 0.2444)

SRRT (Minke Whale)

Gene Details

serrate RNA effector molecule homolog (Arabidopsis)

External Links

Gene match (Identifier: BACU012066, Minke Whale)

Protein Percentage 99.43%
cDNA percentage 98.47%
Ka/Ks Ratio 0.04803 (Ka = 0.0026, Ks = 0.0538)

Additional orthologs identified in other species via the OPTIC pipeline.

SRRT (Human)   Srrt (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4260 bp    Location:524411..544198   Strand:+
Raw sequence 
>bmy_16126
ATGTCCGGGCCCACCTGGCTTCCCCCGAAGCAGCCGGAGCCTGCCAGAGCCCCTCAGGGGAGAGGGCTCCCCCGAGGCGCCTCGGGGCCGCCGGCGGCCCACGGAGCAGGTGCGGGGGTGGGGGCGTGGGGGAGGGGAGAAGAGGGACCCAAGACGGCGGCGTCCACAAGTGTCACCCTCTCCTTCCCCAACCCCACCTTCGCTCTCTCTTCCCTCAACCCAGCACTCCAGCCCCACCCCAGGGTCAATTTTTGCCCCCTCCCATCTGAGCAGTGTTACCAGGCCCCTGGGGGACCGGAGGATCGGGGGCTGGCCTGGGTGGGGTGCCATGGAGCACCCCAGCGCTCGCAGGGGCTCCCCGCAGACAGGGGGGGCTTGCGCCCAGGAAGTCTGGATGCTGAGATAGATTCCCTGACCAGCATGCTGGCTGAGTTGGACGGGGGTCGAGGTCACGCCCCAAGGCGGCCTGACCGGCAGGCTTACGAGCCCCCTCAGCCCCCTGCCTACCGCTCAGGCTCAGGCTCCCTGAAGCCGAATGGAGGGGGTGTTCCTCCCCCGCCGCTCCCAGCATCCCCCTATGGGGGCCCCACTCCAGCCTCCTATGCTACGGCCAGCACCCCCGCCGGCCCTGCCTTCCCTGTGCAAGTGAAGGTGGCACAACCAGTGAGAGGCTGTGGCCCCCCCAGGCGGGGGGCCTCTCAGGCCTCTGGGCCCCTCCCGGGGCCCCACTTTCCTCTCCCAGGCCGAGGTGAAGTCTGGGGGGCTGGCTATAGGAGCCACCGTGAGCCAGGGCCGGGGGGCAAAGAAGAGGCTGCTGGGGTCTCCAGCTCTGCAGGAGGAAGAGGAGGCGGGTACGGGTCCCAGGTCCCCTTGAGCCAGCCTCCCGAGGAGGAGCTTGAGAGGCTGACCAAGAAGCTGGTGCACGACATGAACCACCCACCCAGCGGGGAGTACTTCGGCCGGTGTGGTGGCTGCGGAGAAGATGTGGTCGGGGATGGGGCCGGGGTTGTGGCCCTGGACCGCGTCTTTCACGTTGGCTGCTTTGTGTGTTCTACGTGCCGGGCCCAGCTCCGGGGCCAGCATTTCTACGCCGTGGAGAGGAGGGCATATTGTGAGAGCTGCTATGTGGCCACCCTGGAGAAGTGCTCCACGTGCTCCCAGCCCATTCTGGACCGGATTCTGCGGGCTATGGGGAAGGCCTACCACCCTGGCTGCTTCACCTGTGTGGTGTGCCACCGCGGCCTCGACGGCATCCCTTTCACTGTGGATGCCACCAGCCAGATCCACTGCATTGAGGACTTCCACAGGAAGTTTGCCCCAAGATGCTCAGTGTGTGGTGGGGCCATCATGCCTGAGCCAGGTCAGGAGGAGACGGTGCGAATCGTAGCTCTGGATCGCAGTTTTCACATTGGCTGTTACAAGTGTGAGGAGTGTGGGCTGCTGCTCTCCTCTGAGGGTGAGTGTCAGGGCTGCTACCCGCTGGATGGGCACATCTTGTGCAAGGCTTGCAGTGCCTGGCGCATCCAGGAGCTCTCAGCCACCGCCCCTTCTTTCCGCGCCATGGGTGACAGTGATGACGAGTATGATCGAAGGCGCAGGGACAAGTTTAGACGAGAGCGCAGCGACTATGACCGTTCCCGGGAAAGAGATGAAAGACGTCGAGGGGATGATTGGAATGATCGAGAGTGGGACCGTGGCCGGGAGCGCCGCAGTCGGGGTGAATATCGTGACTATGACAGGAATCGGCGAGAGCGCTTCTCCCCTCCCCGACACGAGCTCAGCCCCCCGCAGAAGCGCATGAGGCGAGACTGGGATGAGCACAGCTCTGACCCATACCACAGTGGCTATGAGATGCCCTATGCTGGGGGGGGTGGGGGCCCAGCCTACGGCCCCCCTCAGCCCTGGGGCCATCCAGACGTCCACATCATGCAGCACCATGTTCTGCCGATCCAGGCCAGGGGGCAGCTGGCTACCTCGGCCCGCCATCCCCCCACCCTCTTCCCCCACAACCAAGACTTCCTGACCGGGCCCCCCCTCAGGCTGGGCAGCATAGCAGAGATCGACTTGGGTGTGCCGCCACCTGTGATGAAGACCTTCAAGGAGTTTCTCCTGTCTTTGGATGACTCTGTGGATGAGACAGAGGCAGTTAAGCGCTATAACGACTACAAGCTGGATTTCCGGAGGCAGCAGATGCAGGATTTCTTCCTGGCTCATAAAGATGAGGAGTGGTTTCGGTCTAAGTACCACCCAGATGAGGTGGGGAAGCGTCGGCAGGAGGCCCGGGGGGCCCTGCAAAACCGACTAAGGGTATTCCTGTCYCTCATGGAGAGTGGCTGGTTTGATAATCTTCTGCTGGACATAGACAAAGCTGATGCCATTGTCAAGATGCTGGATGCAGCTGTGATTAAGATGGAAGGAGGTACAGAGAATGATCTACGCATCCTGGAGCAGGAGGAGGAGGAGGAACAGGCAGGAAAGCCTGGGGAGCCCAGCAAGAAAGAGGAAGGCCGGGTTGGACCAGGCCTGGGGGATGGAGAACGCAAGGCCAATGAGAAGGATGACAAGAAAGAAGATGGCAAACAGGCTGAAAACGACAGTTCTAGTGATGACAAAACTAAGAAATCCGAGGGTGATGGGGACAAGGAAGAGAAGAAAGAAGACTCTGAGAAAGAAGCCAAAAAGAGCAGCAAGAAGCGGAATAGGAAGCATAGTGGTGATGACAGCTTTGACGAAGGCAGTGTGTCCGAGTCGGAGTCAGAGTCGGAGAGCGGCCAGGCCGAGGAGGAGAAGGACGAGGCTGAGGAAGCACTCAAGGAAAAGGAGAAGCCCAAGGAAGAAGAGAGGGAGAAGCCTAAGGATGCTCCTGGGCTGGAATGTAAACCCCGACCGCTGCATAAGACTTGCTCTCTCTTCATGCGCAACATCGCGCCCAACATCTCCCGGGCTGAGATCATTTCTCTTTGTAAAAGATATCCCGGCTTTATGCGTGTGGCATTATCGGAGCCCCAGCCCGAGAGGAGGTTTTTCCGTCGTGGCTGGGTGACCTTTGACCGCAGCGTTAACATTAAAGAGATCTGCTGGAACCTGCAGAATATCCGACTCCGGGAGTGTGAGCTGAGCCCTGGTGTGAACAGAGACCTGACCCGTCGCGTCCGCAACATCAACGGCATCACCCAGCACAAGCAGATAGTGCGCAACGACATCAAGCTGGCGGCCAAGCTGATCCATACGCTGGACGACAGGACCCAGCTCTGGGCCTCTGAGCCTGGGACGCCGCCTCTGCCAACGAGTCTGCCCTCGCAGAACCCCATCCTGAAGAATATCACTGACTACCTGATTGAGGAAGTGAGTGCTGAGGAGGAGGAGCTGCTGGGGAGCAGTGGGGGGGCCCCTCCTGAGGAGCCTCCTAAGGAAGGGAACCCAGCAGAGATCAACGTGGAGCGGGATGAGAAGCTGATCAAGGTTTTGGACAAACTCCTCCTTTATTTGCGCATCGTGCATTCCCTGGATTATTATAACACGTGCGAGTACCCCAATGAGGATGAGATGCCCAACCGCTGTGGCATCATCCATGTTCGGGGGCCCATGCCGCCCAACCGCATCAGTCATGGAGAAGTGCTAGAATGGCAGAAGACATTTGAGGAGAAGCTGACTCCGCTGCTGAGCGTGCGGGAATCTCTTTCAGAGGAAGAGGCCCAGAAGATGGGTCGCAAAGACCCTGAGCAGGAAGTGGAAAAGTTTGTGACCTCCAACACCCAGGAACTGGGCAAGGATAAGTGGCTGTGCCCTCTCAGTGGCAAGAAATTCAAGGGCCCTGAGTTTGTCCGCAAACATATCTTCAACAAGCATGCAGAGAAAATTGAGGAAGTGAAGAAGGAGGTAGCATTTTTTAACAACTTTCTCACTGATGCCAAGCGACCAGCTCTGCCTGAGATCAAGCCAGCTCAGCCACCTGGCCCTGCCCAGAGTCTGACCCCGGGACTCCCCTACCCACACCAGACTCCCCAGGGCCTGATGCCCTATGGTCAGCCCCGGCCCCCCATCTTGGGCTATGGAGCTGGTGCTGTTCGCCCTGCAGTCCCCACAGGAGGGCCTCCATACCCCCATGCTCCCTATGGTGCTGGCCGAGGGAACTATGATGCCTTCCGAGGCCAGGGAGGTTATCCTGGGAAACCCCGAAACAGGATGGTCCGTGGAGACCCACGGGCCATTGTGGAATACCGTGATCTGGATGCTCCAGATGATGTGGATTTCTTTTGA

Related Sequences

bmy_16126T0 SequenceType object (3)

Length: 1420 aa      View alignments
>bmy_16126T0
MSGPTWLPPKQPEPARAPQGRGLPRGASGPPAAHGAGAGVGAWGRGEEGPKTAASTSVTLSFPNPTFALSSLNPALQPHPRVNFCPLPSEQCYQAPGGPEDRGLAWVGCHGAPQRSQGLPADRGGLRPGSLDAEIDSLTSMLAELDGGRGHAPRRPDRQAYEPPQPPAYRSGSGSLKPNGGGVPPPPLPASPYGGPTPASYATASTPAGPAFPVQVKVAQPVRGCGPPRRGASQASGPLPGPHFPLPGRGEVWGAGYRSHREPGPGGKEEAAGVSSSAGGRGGGYGSQVPLSQPPEEELERLTKKLVHDMNHPPSGEYFGRCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCESCYVATLEKCSTCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIGCYKCEECGLLLSSEGECQGCYPLDGHILCKACSAWRIQELSATAPSFRAMGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPAYGPPQPWGHPDVHIMQHHVLPIQARGQLATSARHPPTLFPHNQDFLTGPPLRLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLRVFLSLMESGWFDNLLLDIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKPGEPSKKEEGRVGPGLGDGERKANEKDDKKEDGKQAENDSSSDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRKHSGDDSFDEGSVSESESESESGQAEEEKDEAEEALKEKEKPKEEEREKPKDAPGLECKPRPLHKTCSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWNLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASEPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQSLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF*