Sequence details bmy_16160 (Coding sequence)

Part of scaffold_1277 (Scaffold)

For more information consult the page for scaffold_1277 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HIAT1 ENSTTRG00000015284 (Bottlenosed dolphin)

Gene Details

hippocampus abundant transcript 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014487, Bottlenosed dolphin)

Protein Percentage 76.16%
cDNA percentage 76.01%
Ka/Ks Ratio 0.50216 (Ka = 0.0472, Ks = 0.0939)

HIAT1 ENSBTAG00000015776 (Cow)

Gene Details

hippocampus abundant transcript 1 protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020947, Cow)

Protein Percentage 94.73%
cDNA percentage 92.38%
Ka/Ks Ratio 0.23067 (Ka = 0.0441, Ks = 0.1912)

Additional orthologs identified in other species via the OPTIC pipeline.

HIAT1 (Human)   Hiat1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1368 bp    Location:210189..248668   Strand:+
Raw sequence 
>bmy_16160
ATGACCCAGGGGAAGAAGAAGAAACGGGCCGCGAACCGCAGTATCATGCTGGCCAAGAAGATCATCATTAAGGACGGAGGCACGCCTCAAGGAATAGGTTCTCCTAGTGTTTATCATGCGGTTATCGTCATCTTTTTGGAGTTTTTTGCTTGGGGATTATTGACAGCACCCACCTTGGTGGTATTACATGAAACCTTCCCTAAACATACATTTCTGATGAATGGCCTAATTCAAGGAGTAAAGGGTTTGTTGTCATTCCTCAGTGCCCCACTTATTGGTGCTCTTTCTGATGTTTGGGGCCGAAAATCCTTCTTGCTGCTAACAGTATTTTTCACGTGTGCCCCAATTCCTTTAATGAAGATCAGCCCATGGTGGTACTTTGCTGTTATCTCTGTTTCTGGGGTTTTTGCAGTGACTTTCTCTGTGGTATTTGCATATGTAGCAGATATAACCCAAGAACATGAAAGAAGTATGGCTTATGGATTGGTTTCGGCAACATTTGCTGCAAGTTTGGTAACCAGCCCTGCAATTGGCGCTTATCTTGGGCGAGTGTATGGGGACAGCTTGGTGGTGGTCCTGGCTACAGCGATAGCTCTGCTAGATATTTGTTTTATCCTTGTTGCTGTGCCGGAGTCATTACCTGAGAAGATGCGGCCCGCATCATGGGGAGCACCCATTTCCTGGGAACAGGCTGACCCCTTTGCATCCTTAAAAAAAGTGGGCCAAGACTTCACTGTGCTGCTGATCTGCATTACGGTGTTTCTCTCCTACTTGCCGGAGGCAGGCCAATATTCCAGCTTTTTTTTATACCTCAGACAGAGTATCAGCCAGTCATCAAGTAGTGATTTCCTGAATTATTTTCACTTCTTCCTCTATGGACTTAATAGCTATCTTAAGGGGATGATGTGGGCTGCTGGGGCAGTGGCAGCCATGTCTAGCATTACCTTTCCAGCTGTCAGTGCACTTGTTTCACGAACTGCTGATGCTGATCAACAAGGTGTCGTCCAAGGGATGATAACAGGAATTAGAGGATTATGCAATGGTCTGGGACCAGCCCTTTATGGATTCATTTTCTACATATTCCATGTGGAACTTAAAGAACTGCCAATGACAGGAACAGACTTGGGAACAAACACAAGCCCACAGCACCACTTTGAACAGAATTCCATCATCCCTGGCCCCCCCTTCCTCTTTGGAGCCTGTTCAGTACTGCTGGCTCTGCTTGTTGCCTTGTTTATTCCGGAGCATACCAATTTAAGCTTAAGGTCCAGCAGCTGGAGAAAGCACTGTGGCAGCCACAGCCATCCTCATAGTGCGCAAGCGCCAGGAGAGGCCAAAGAACCTTTACTCCAGGACACAAATGTGTGA

Related Sequences

bmy_16160T0 Protein

Length: 456 aa      View alignments
>bmy_16160T0
MTQGKKKKRAANRSIMLAKKIIIKDGGTPQGIGSPSVYHAVIVIFLEFFAWGLLTAPTLVVLHETFPKHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKSFLLLTVFFTCAPIPLMKISPWWYFAVISVSGVFAVTFSVVFAYVADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFILVAVPESLPEKMRPASWGAPISWEQADPFASLKKVGQDFTVLLICITVFLSYLPEAGQYSSFFLYLRQSISQSSSSDFLNYFHFFLYGLNSYLKGMMWAAGAVAAMSSITFPAVSALVSRTADADQQGVVQGMITGIRGLCNGLGPALYGFIFYIFHVELKELPMTGTDLGTNTSPQHHFEQNSIIPGPPFLFGACSVLLALLVALFIPEHTNLSLRSSSWRKHCGSHSHPHSAQAPGEAKEPLLQDTNV*