Part of scaffold_1277 (Scaffold)

For more information consult the page for scaffold_1277 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRMT13 ENSTTRG00000015302 (Bottlenosed dolphin)

Gene Details

tRNA methyltransferase 13 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014503, Bottlenosed dolphin)

Protein Percentage 33.88%
cDNA percentage 35.37%
Ka/Ks Ratio 0.5044 (Ka = 0.1453, Ks = 0.2881)

CCDC76 ENSBTAG00000015781 (Cow)

Gene Details

tRNA guanosine-2'-O-methyltransferase TRM13 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020955, Cow)

Protein Percentage 87.89%
cDNA percentage 90.49%
Ka/Ks Ratio 0.35832 (Ka = 0.0718, Ks = 0.2004)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 771 bp    Location:300058..323146   Strand:+
>bmy_16164
ATGGCGGCTTCTGCGCCGACGCCGCACGGAACTGGCTTTCCAGCAGAGGGGCGATGTGGCTACTATGTGGAAAAGAAGAAGCGCTTCTGCAGGATGGTGGTGGCAGCAGGAAAAAGGTTCTGTGGTGAACACGCTGGAGCCGCGGAGGAAGAAAATGCTCGGAAAAGAATCCTGTGTCCTTTAGATCCAAAACACACAGTATATGAAGATCAACTAGCAAAACATTTGAAAAAATGTAACTCAAGAGAGAAGCCAAAACCTAAACTGAGAAAAGCAAGTGAGGCTTTTGTGCTTTTATTTGGCACAGGTTTGAACTCTACACTTAAAGATCAAATTATGTCCCATCCAGCATTGCATGATGCCCTTAATGACCCTAAAAACGGTGATTCTGCAACCAAACATCTGAAACAGCAGTTACTTGGTCCAAGAAGATGCTTTGTTGAGTTTGGAGCAGGAAAGGGAAAATTATCTCATTGGGTTGATATTGCCTTAAAAGATGCTGAAAAAGTTCACTTCATCCTAGTAGAAAAGGTGACCACAAGATTCAAGGTAAGTGAAACCATTGTAGTATATTGGTTTCTTACTGTTGAAGAAAAGAAGAAAATAGGGCATCTTTGTAAATTGCTGATTGACCAAGGCCGAATCAACTATTTACAGCAGAAAGGATTCARTCCCGCTTTACAGTATTATACAGACCCTCTGGTGTCTTTGGAAAATGTATTGTTAACTGCTCTACCAAAYCATTCTTCATCACCAGAAACAACTGCTTAA

Related Sequences

bmy_16164T0 Protein

Length: 257 aa      View alignments
>bmy_16164T0
MAASAPTPHGTGFPAEGRCGYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCPLDPKHTVYEDQLAKHLKKCNSREKPKPKLRKASEAFVLLFGTGLNSTLKDQIMSHPALHDALNDPKNGDSATKHLKQQLLGPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVSETIVVYWFLTVEEKKKIGHLCKLLIDQGRINYLQQKGFXPALQYYTDPLVSLENVLLTALPNHSSSPETTA*