Part of scaffold_1277 (Scaffold)

For more information consult the page for scaffold_1277 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC39 ENSTTRG00000015315 (Bottlenosed dolphin)

Gene Details

leucine rich repeat containing 39

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014510, Bottlenosed dolphin)

Protein Percentage 95.0%
cDNA percentage 96.97%
Ka/Ks Ratio 0.38386 (Ka = 0.0227, Ks = 0.0593)

LRRC39 ENSBTAG00000015786 (Cow)

Gene Details

Leucine-rich repeat-containing protein 39

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000048641, Cow)

Protein Percentage 91.82%
cDNA percentage 94.39%
Ka/Ks Ratio 0.36802 (Ka = 0.0421, Ks = 0.1144)

LRRC39  (Minke Whale)

Gene Details

leucine rich repeat containing 39

External Links

Gene match (Identifier: BACU020318, Minke Whale)

Protein Percentage 98.18%
cDNA percentage 99.24%
Ka/Ks Ratio 1.94163 (Ka = 0.0092, Ks = 0.0047)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 663 bp    Location:343612..328439   Strand:-
>bmy_16165
ATGTCAGAAAATGTGGTTTGTGCTGGGGCTGTCAATTCTTTAAAGGAAGTTTGGGAGAAAAGAATAAAGAAATACAATGAAGACCTGAAGCGAGAGAAGGAATTTCAACAAAAGCTAGTGGGAATCTGGGAAGAACGAGTGAGCTTAACCAAGCTAAGAGAAAAGGTCACCAGGGAAGACGGAAGGGTCATTTTGAAGATAGAAAAAGAGGAATGGAAGACCCTCCCTTCTTCTCTAGTAAAACTAAATCAGCTACAGGAATGGCAACTTCATAGAACTGGCTTGGTGAAAATTCCTGAATTCATCGGAAGATTCCAGAACCTTATTGTGTTAGATTTATCTCGAAACACAATTTCAGACATACCTCGAGGAATTGGACTGCTCACTAGACTTCAGGAACTGATTCTTAGTTACAACAATATCAAAACTGTCCCCAAGGAACTAAGTAACTGTGCCAGCTTGGAGAAACTTGAACTTGCTGTTAACAGAGATATATGTGATCTTCCACAAGAGCTCAGCAATTTGTTAAAGCTTACGCACCTTGATTTGAGTATGAACCACTTTACTACTATCCCTCCTGCTGTGTTGAACATGCCTGCCCTTGAGTGGCTTGATATGGGAAGCAACAGACTTGAACAACTTCCTGATACTATAGAAAGGTAA

Related Sequences

bmy_16165T0 Protein

Length: 221 aa      View alignments
>bmy_16165T0
MSENVVCAGAVNSLKEVWEKRIKKYNEDLKREKEFQQKLVGIWEERVSLTKLREKVTREDGRVILKIEKEEWKTLPSSLVKLNQLQEWQLHRTGLVKIPEFIGRFQNLIVLDLSRNTISDIPRGIGLLTRLQELILSYNNIKTVPKELSNCASLEKLELAVNRDICDLPQELSNLLKLTHLDLSMNHFTTIPPAVLNMPALEWLDMGSNRLEQLPDTIER*