Sequence details bmy_16179 (Coding sequence)

Part of scaffold_1272 (Scaffold)

For more information consult the page for scaffold_1272 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMYD5 ENSTTRG00000000820 (Bottlenosed dolphin)

Gene Details

SMYD family member 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000773, Bottlenosed dolphin)

Protein Percentage 98.63%
cDNA percentage 98.35%
Ka/Ks Ratio 0.11133 (Ka = 0.006, Ks = 0.0543)

SMYD5 ENSBTAG00000008764 (Cow)

Gene Details

SET and MYND domain-containing protein 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011544, Cow)

Protein Percentage 96.98%
cDNA percentage 96.06%
Ka/Ks Ratio 0.10535 (Ka = 0.0146, Ks = 0.1381)

SMYD5  (Minke Whale)

Gene Details

SMYD family member 5

External Links

Gene match (Identifier: BACU010562, Minke Whale)

Protein Percentage 96.34%
cDNA percentage 96.75%
Ka/Ks Ratio 0.26766 (Ka = 0.0222, Ks = 0.0828)

Additional orthologs identified in other species via the OPTIC pipeline.

SMYD5 (Human)   Smyd5 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1095 bp    Location:290325..273985   Strand:-
Raw sequence 
>bmy_16179
ATGGCGGCCTCCATGTGCGACGTGTTCTCCTTCTGCGTGGGCGTGGCGGGCCGAGCCCGTGTCGCCGTGGAAGTCCGCTTCGTGAGCAGCGCCAAGGGAAAGGGGTTGTTTGCCACACAGCTGATCCAGAAGGGGGAGACCATATTCATCGAACGGCCCCTGGTGGCTGCACAGTTTCTCTGGAATGCACTTTATCGCTACCGAGAATGTCTACTAGCCGCAGCTGAGCAATACCATCAGGTCCTGTGCCCAGGCCCCTCCCAGGATGACCCCCTGCATCCTCTCAATAAGCTGCAGGAGGCATGGAGGAGTGTTCACTACCCCCCTGAGACTGCAAGCATCATGTTGATGGCCCGGATGGTGGCGACAGTGAAACAGGCGAAGGATAAGGATCGTTGGATCAGGCTCTTCTCCCAGTTCTGTAATAAAACGGCCAATGAGGAGGAGGAAATTGTCCACAAACTCCTGGGGGACAAATTCAAGGGCCAGCTGGAGCTTCTGCGGAGACTCTTCACAGAGGCCCTTTATGAGGAAGCACTCAGCCAGTGGTTCACTCCGGATGGATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATTGGGACCAGCTCCCTGAGCCAGTGGGTCCATGCCTGTGACGCTCTGGAGCTGAAACCTCAGGACCGTGAGCAGCTGGACACCTTCATTGACCAACTGTACAAGGACATCGAGGCAGCAACTGGTGAGTTTCTTAACTGTGAAGGATCTGGCCTCTTTGTGCTGCAGAGCTGCTGCAACCACAGCTGTGTCCCCAATGCAGAGACCTCCTTCCCAGAAAACAACTTCCTTTTGCATGTCACCGCCCTGGAGGATATTAAGCCAGGAGAGGAAATCTGCATCAGCTACTTAGACTGCTGTCAGCGGGAGCGCAGCCGCCACAGCCGCCACAAGATCCTCAGGGAGAACTATCTGTTCGTCTGTTCCTGCCCCAAATGTCTGGCAGAGGCTGATGAACCCAACATGACCTCTGAGGAGGAGGACGAGGAAGAGGACGAGGAAGGAGAGCCGGAAGATGCTGAGCTGGGGGATGAGATGACTGATGTGTGA

Related Sequences

bmy_16179T0 Protein

Length: 365 aa      View alignments
>bmy_16179T0
MAASMCDVFSFCVGVAGRARVAVEVRFVSSAKGKGLFATQLIQKGETIFIERPLVAAQFLWNALYRYRECLLAAAEQYHQVLCPGPSQDDPLHPLNKLQEAWRSVHYPPETASIMLMARMVATVKQAKDKDRWIRLFSQFCNKTANEEEEIVHKLLGDKFKGQLELLRRLFTEALYEEALSQWFTPDGFRSLFALVGTNGQGIGTSSLSQWVHACDALELKPQDREQLDTFIDQLYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAETSFPENNFLLHVTALEDIKPGEEICISYLDCCQRERSRHSRHKILRENYLFVCSCPKCLAEADEPNMTSEEEDEEEDEEGEPEDAELGDEMTDV*