Sequence detailsbmy_16191 (Coding sequence)

Part of scaffold_1266 (SequenceType object (1))

For more information consult the page for scaffold_1266 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM33ENSTTRG00000002713 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 33

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002542, Bottlenosed dolphin)

Protein Percentage 92.68%
cDNA percentage 94.09%
Ka/Ks Ratio 0.7709 (Ka = 0.0583, Ks = 0.0756)

TRIM33ENSBTAG00000001499 (Cow)

Gene Details

E3 ubiquitin-protein ligase TRIM33

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001967, Cow)

Protein Percentage 92.29%
cDNA percentage 92.03%
Ka/Ks Ratio 0.35851 (Ka = 0.0601, Ks = 0.1675)

TRIM33 (Minke Whale)

Gene Details

tripartite motif containing 33

External Links

Gene match (Identifier: BACU018655, Minke Whale)

Protein Percentage 93.19%
cDNA percentage 94.31%
Ka/Ks Ratio 0.76029 (Ka = 0.0559, Ks = 0.0735)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIM33 (Human)   Trim33 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3165 bp    Location:381196..533394   Strand:+
Raw sequence 
>bmy_16191
ATGGCGGAAAACAAAGGCGGTGGCGAGGCTGAGAGCGGCGGCGGGGGCAGCAGCAGCGCGCCGGTAACTCTCGCCGCGGTGCTGGTGGAGGAGGAGGAGGAGGAAGGCGGCAGGGCCGGCGCGGAGAGCGGCGCGGCAGGGCCTGACGACGGGGGGGTGGCCGCGGCCTCCTCGGGCTCGGCCCCGGCTGCCTCAGCCCCTGCAGCCTCAGTGGGCCCTGGAGTTTCCGGGGGGGCGGTATCGACGCCGGCCCCAGCTCCGGCTTCGGTTCCTGCTCCGGGTCCCTCGGCGGGGCCGCCTCCTGGACCGCCAGCCTCGCTCCTGGACACCTGCGCCGTGTGTCAGCAGAGCCTGCAGAGCCGGCGTGAGGCGGAGCCCAAGCTGCTGCCCTGTCTTCACTCTTTCTGCCTGCGCTGTCTGCCGGAGCCCGAGCGCCAACTCAACGTGCCCATCCCGGGGGGCAGCAACGGCGACATCCAGCAAGTTGGTGTAATACGGTGCCCAGTATGCCGCCAAGAATGCAGACAGATAGACCTTGTGGATAATTATTTTGTGAAAGATACATCTGAAGCTCCTAGCAGTTCTGATGAGAAATCAGAACAGGTATGTACTAGTTGTGAAGACAATGCAAGTGCAGTTGGCTTTTGTGTAGAATGTGGAGAGTGGCTATGTAAGACATGTATTGAAGCACATCAAAGAGTAAAATTCACTAAAGATCACTTGATCAGGAAGAAAGAAGATGTCTCAGAGTCTGTTGGAGCATCTGGTCAGCGCCCTGTTTTCTGCCCTGTACACAAACAAGAACAGTTGAAACTTTTCTGTGAAACATGTGATAGGCTGACATGTAGAGACTGTCAGCTATTGGAACACAAAGAACATAGGTATCAATTTTTAGAAGAAGCTTTTCAAAACCAGAAAGGTGCAATTGAAAATCTACTGGCTAAGCTTCTTGAGAAGAAGAATTATGTTCATTTTGCAGCTACTCAGGTGCAGAATAGGATAAAAGAAGTAAATGAGACTAACAAACGAGTAGAACAGGAAATTAAAGTGGCCATTTTCACCCTTATCAATGAAATTAATAAGAAAGGAAAATCTCTGTTACAGCAGCTAGAGATTACTTTTCAATTGCGCCATATTCTGAAAGCACGGTGTGATCCTGTCCCTGCTGCTAATGGAGCAATACGTTTCCATTGTGATCCCACCTTCTGGGCAAAGAACGTAGTCAATTTAGGTAATCTAGTAATAGAGAGTAAACCAGCTCCTGGTTATACTCCTAATGTTGTAGTTGGGCAAGTTCCGCCAGGGACAAACCACATTAGTAAAACCCCTGGACAGATTAACTTAGCACAGCTTCGACTCCAGCACATGCAACAACAAGTGTATGCACAGAAACATCAGCAGTTGCAACAGATGAGGATGCAGCAGCCACCTGCACCTGTACCAACAACAACAGCAACAACACAGCAGCACCCTAGACAAGCAGCCCCTCAGATGTTACAACAACAGGCGACCGCCAAGATTGATCAGTGTGCAAGCAATGCAAAGAGGCAACATGAACTGTGGAGCTTTCCAAGCCCATCAGATGAGATTGGCTCAGAATGCTGCCCGAATACCAGGGATACCCAGGCACAGTGGCCCTCAGTATTCCATGATGCAGCCACACCTCCAAAGACAAGTATGCCTAGAGTTCCATTTCACTCAAACCCAGGGCATGCTGGACCCTTTCCTGTTGTGTCGGTGCACAACAACCCAGTCAATCCAACCAGCCCTACTACAGCTACTATGGCAAATGCAAATCGAGGTCCCACCAGCCCATCTGTTACAGCAATAGAACTAATTCCCTCAGTTACCAATCCAGAAAACCTTCCGTCTCTGCCAGATATTCCACCCATACAGTTGGAAGATGCTGGTTCAAGTAGTTTAGATAATCTACTAAGTAGATACATCTCAGGCAGTCACCTACCCCCACAGCCCACAAGCACCATGAATCCCTCCCCAGGACCCTCTGCCCTATCACCAGGATCATCAGATAAGGACTCAAAAGCTGAAACAGTGATTCCTTTGAGGACACTTCATGAACCACTGTTATTGAGGTTTCCTTCAGATGTTTGGGGCTGTGGGTCGTCAGGAAGAACTGCTGAGAAGACAAGTCTTAGTTTCAAGTCTGATCAAGTGAAGGTCAAGCAAGAACCTGGCACTGAAGATGAAATATGTAGCTTTTCAGGAGCTGTGAAACAGGAAAAGACAGAGGATGGCAGGAGGAGTGCCTGCATGTTGAGCAGTCCTGAGAGTAGCTTGACACCACCTCTTTCAACTAGCCTGCATCTAGAGAGTGAGTTGGACGCATTAGCAGGCCTGGAAAACCACGTGAAAACTGAACCTGCAGATGTGAATGAAAGCTGCAAACAGTCAGGGCTCAACAGCCTTGTTAATGGAAAGTCCCCAGTTCGAAGTCTCATGCACAGGTCGGCAAGGATTGGAGGAGATGGCAGCAGCAAAGATGATGACCCAAATGAAGATTGGTGTGCTGTCTGCCAAAATGGAGGGGATCTCTTGTGCTGTGAAAAATGTCCAAAGGTCTTTCATCTAACTTGTCATGTTCCAACACTTCTTAGCTTTCCAAGTGGGGACTGGATATGCACATTTTGCAGAGATATTGGGAAACCAGAAGTTGAATATGATTGTGATAATTTGCAACATAGTAAGAAGGGGAAAACTGCACAGGGGTTAAGCCCCGTGGACCAAAGGATACCAAACTACTATAAAATTATAAAGAAACCTATGGATTTATCCACCGTGAAAAAGAAGCTTCAGAAAAAACATTCCCAACACTACCAAATCCCAGATGACTTTGTGGCTGATGTTCGTTTGATCTTCAAGAACTGTGAAAGGTTTAATGAAATGATGAAAGTTGTTCAAGTTTATGCAGAAACACAAGAGATTAATTTGAAGGCTGATTCAGAAGTAGCTCAGGCAGGGAAAGCAGTTGCATTGTACTTTGAAGATAAACTCACAGAGATCTACTCAGACAGGACCTTCGCACCTTTGCCAGAGTTTGAGCAGGAAGAGGATGATGGTGAGGTAACTGAGGACTCTGATGAAGACTTTATACAGCCCCGCAGAAAACGCCTAAAGTCAGATGAGAGACCAGTACATATAAAGTAA

Related Sequences

bmy_16191T0 SequenceType object (3)

Length: 1055 aa      View alignments
>bmy_16191T0
MAENKGGGEAESGGGGSSSAPVTLAAVLVEEEEEEGGRAGAESGAAGPDDGGVAAASSGSAPAASAPAASVGPGVSGGAVSTPAPAPASVPAPGPSAGPPPGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLRCLPEPERQLNVPIPGGSNGDIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQQLEITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQVPPGTNHISKTPGQINLAQLRLQHMQQQVYAQKHQQLQQMRMQQPPAPVPTTTATTQQHPRQAAPQMLQQQATAKIDQCASNAKRQHELWSFPSPSDEIGSECCPNTRDTQAQWPSVFHDAATPPKTSMPRVPFHSNPGHAGPFPVVSVHNNPVNPTSPTTATMANANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLLSRYISGSHLPPQPTSTMNPSPGPSALSPGSSDKDSKAETVIPLRTLHEPLLLRFPSDVWGCGSSGRTAEKTSLSFKSDQVKVKQEPGTEDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTSLHLESELDALAGLENHVKTEPADVNESCKQSGLNSLVNGKSPVRSLMHRSARIGGDGSSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDNLQHSKKGKTAQGLSPVDQRIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFNEMMKVVQVYAETQEINLKADSEVAQAGKAVALYFEDKLTEIYSDRTFAPLPEFEQEEDDGEVTEDSDEDFIQPRRKRLKSDERPVHIK*