Part of scaffold_1285 (Scaffold)

For more information consult the page for scaffold_1285 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPP1R16B ENSTTRG00000007692 (Bottlenosed dolphin)

Gene Details

protein phosphatase 1, regulatory subunit 16B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007277, Bottlenosed dolphin)

Protein Percentage 89.23%
cDNA percentage 90.82%
Ka/Ks Ratio 0.34779 (Ka = 0.0751, Ks = 0.2159)

PPP1R16B ENSBTAG00000000653 (Cow)

Gene Details

Protein phosphatase 1 regulatory inhibitor subunit 16B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000858, Cow)

Protein Percentage 87.59%
cDNA percentage 86.86%
Ka/Ks Ratio 0.16825 (Ka = 0.0822, Ks = 0.4884)

PPP1R16B  (Minke Whale)

Gene Details

protein phosphatase 1, regulatory subunit 16B

External Links

Gene match (Identifier: BACU015498, Minke Whale)

Protein Percentage 61.59%
cDNA percentage 65.4%
Ka/Ks Ratio 0.31073 (Ka = 0.3764, Ks = 1.2115)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1647 bp    Location:233522..210795   Strand:-
>bmy_16209
ATGTCACCTCTTGCCAGGAGGCTGGGTGGAGGCCTCAACCTCCCCTTCACAGGGGTCTCTGTTCACACTCAGGCCAAGGGTGCCACTGGGGCTTTGGGTCCGGGAGCTGGGACTAATGAAGACGGCCCCCATCCCCGCTGCTCTAGAGACCTCATCTTCTTCCCCAGCACCCGCTGCGGGTGCCGAGCAGTGCGCTACTTCCTGAAGAATAAGGTCAGCCCTGATTTGTGTAATGAGGATGGACTCACAGCCCTGCACCAGTGCTGCATTGACAACTTTGAGGAAATTGTCAAGTTGCTCCTTTCCCACGGTGCCAATGTGAACGCCAAGGACAACGAGCTGTGGACGCCCCTGCATGCCGCGGCCACCTGCGGCCACATCAACCTGGTGAAAATCCTCGTTCAGTATGGGGCCGACTTGCTTGCCGTCAACTCCGATGGGAACATGCCCTATGACCTCTGCGAGGATGAGCCCACCCTGGATGTCATCGAGACGTGCATGGCGTACCAGGGCATCACCCAAGAGAAAATCAATGAGAAGCGGGCAGCTCCTGAGCAGCAGATGATGTCGGACATTCACTGTATGATAGCAGCCGGCCAGGACCTTGACTGGGTAGATGCCCAGGGTGCCACACTGCTGCACATAKCTGGAGCCAATGGATACCTGCGGGCAGCCGAGCTCCTCCTGGACCACGGGGTGCGCGTGGATGTGAAGGACTGGGATGGCTGGGAACCCCTGCACGCGGCTGCCTTCTGGGGACAGATGCAGATGGCAGAGCTATTGGTGTCCCATGGGGCCAGTCTCAGTGCTAGGACGTCCATGGATGAGATGCCAATAGACCTGTGTGAAGAGGAAGAGTTCAAGGTACTGCTGTTGGAGCTGAAACATAAGCACGACGTGATCATGAAGTCGCAGTTGAGGCACAAGTCATCCTTGAGCAGGAGGACGTCCAGTGCGGGCAGCCGCGGGAAGGTGGTGCGTCGAGCCAGCCTGTCGGACAGAACCAACCTGTACAGGAAGGAGTATGAGGGAGAGGCCATACTATGGCAGCAGAGGAGCGCAGCCGAGGATCAGCGGACCTCCATCTACAATGGGGACATCAGGGAGACCAGGACAGACCAAGAGAATAAGGACCCGAACCCCAGGCTGGAGAAACCCGTGCTGCTCTCCGAGTTTCCTACCAAGATCCCACGAAGTGAAATGGACGTGCCTGTTGAGAACGGTCTCCGGGCTCCGGTCAGCACCTACCAGTATGCGCTGTCCAACGGGGACGTCTGGAAAGTGCATGAGGTGCCGGACTACAACATGGCCTATGGCAACCCTGGCATGGCCGATGCCACCCCGCCCTGGAGTGGCTACAAGGAACAGAGCCCCCAGACGCTTCTGGAGCTGAAGCGGCAGCGGGCTGCAGCCAAGCTGCTCAGCCACCCCTTCCTGAGCACCCATCTGGGTAGCGGCATGGCCAGGACGGGTGAGGGCAGCAGTGAAGGCAAGGCCCCCTTGATCGGAGGCAGAACTTCCCCGTACAGCAGCAATGGGACCTCGGTGTATTACACAGTCACCAGTGGAGATCCCCCACTCTTGAAGTTCAAGGCCCCCATGGAGGAGATGGAGGAGAAGGTCCACGGCTGCTGCCGCATCTCCTAG

Related Sequences

bmy_16209T0 Protein

Length: 549 aa      View alignments
>bmy_16209T0
MSPLARRLGGGLNLPFTGVSVHTQAKGATGALGPGAGTNEDGPHPRCSRDLIFFPSTRCGCRAVRYFLKNKVSPDLCNEDGLTALHQCCIDNFEEIVKLLLSHGANVNAKDNELWTPLHAAATCGHINLVKILVQYGADLLAVNSDGNMPYDLCEDEPTLDVIETCMAYQGITQEKINEKRAAPEQQMMSDIHCMIAAGQDLDWVDAQGATLLHIXGANGYLRAAELLLDHGVRVDVKDWDGWEPLHAAAFWGQMQMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELKHKHDVIMKSQLRHKSSLSRRTSSAGSRGKVVRRASLSDRTNLYRKEYEGEAILWQQRSAAEDQRTSIYNGDIRETRTDQENKDPNPRLEKPVLLSEFPTKIPRSEMDVPVENGLRAPVSTYQYALSNGDVWKVHEVPDYNMAYGNPGMADATPPWSGYKEQSPQTLLELKRQRAAAKLLSHPFLSTHLGSGMARTGEGSSEGKAPLIGGRTSPYSSNGTSVYYTVTSGDPPLLKFKAPMEEMEEKVHGCCRIS*