Part of scaffold_1308 (Scaffold)

For more information consult the page for scaffold_1308 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PID1 ENSTTRG00000013484 (Bottlenosed dolphin)

Gene Details

phosphotyrosine interaction domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012789, Bottlenosed dolphin)

Protein Percentage 66.4%
cDNA percentage 73.91%
Ka/Ks Ratio 0.37128 (Ka = 0.2732, Ks = 0.7359)

PID1 ENSBTAG00000037640 (Cow)

Gene Details

PTB-containing, cubilin and LRP1-interacting protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021532, Cow)

Protein Percentage 83.25%
cDNA percentage 83.91%
Ka/Ks Ratio 0.1931 (Ka = 0.1137, Ks = 0.589)

PID1  (Minke Whale)

Gene Details

phosphotyrosine interaction domain containing 1

External Links

Gene match (Identifier: BACU001380, Minke Whale)

Protein Percentage 68.67%
cDNA percentage 75.5%
Ka/Ks Ratio 0.40614 (Ka = 0.2548, Ks = 0.6274)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 762 bp    Location:259746..266400   Strand:+
>bmy_16221
ATGAAATATGCACTGGCCACCAAGAGGAAGGAACGGAACGACGGGCAGGATCACAGGGTTCTCATTCACAGACCCTACATTGCTGCACAGCTATATCCGTGGTGGAAGCCCCGAGGCAGCCTTGCACACTGGTCCTGTGTTCTCACTCATAAGGAGGATGTGCCTACAGAGGTCAACAATATGGGTGAATGCCAGACTCTGGAGAACTTAATGGGATCATTAGGATATCTGCAGGCAGGGAGCAAGAAAGATGTCTCTCCATCCTTCCAGGGTGACGCCATGATTGTGACCTATCTGGGTAAGGTCCCCACCACAGGCATGCAGTTTTTGTCAGGCTGCACAGAAAAGCCGGTCATCGAGCTCTGGAAAAAGCACACGCTAGCCCGAGAAGACGTCTTTCCAGCCAATGCCCTCCTGGAAATCCGACCGTTCCAAGTGTGGCTCCATCACCTCGACCACAAAGGGGAGGCCACGGTGCACATGGATACCTTCCAGGTGGCCCGCATTGCCTACTGCACCGCCGACCACAACGTGAGCCCCGACATCTTCGCCTGGGTTTACAGGGAGATTAATGACGACCTGTCCTACCAGATGGACTGCCACGCTGTCGAGTGCGAGAGCAAGCTGGAGGCCAAGAAGCTGGCCCACGCCATGATGGAGGCCTTCAAGAAGACTTTCCACAGTATGAAGAGCGACGGCCGGATCCACAGGAATGGCTCCTCGGAAGAGGTGTCCCAGGAATTGGAATCCGATGACGGCTGA

Related Sequences

bmy_16221T0 Protein

Length: 254 aa      View alignments
>bmy_16221T0
MKYALATKRKERNDGQDHRVLIHRPYIAAQLYPWWKPRGSLAHWSCVLTHKEDVPTEVNNMGECQTLENLMGSLGYLQAGSKKDVSPSFQGDAMIVTYLGKVPTTGMQFLSGCTEKPVIELWKKHTLAREDVFPANALLEIRPFQVWLHHLDHKGEATVHMDTFQVARIAYCTADHNVSPDIFAWVYREINDDLSYQMDCHAVECESKLEAKKLAHAMMEAFKKTFHSMKSDGRIHRNGSSEEVSQELESDDG*