Part of scaffold_1280 (Scaffold)

For more information consult the page for scaffold_1280 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LAMA4 ENSTTRG00000003963 (Bottlenosed dolphin)

Gene Details

laminin, alpha 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003738, Bottlenosed dolphin)

Protein Percentage 98.48%
cDNA percentage 98.55%
Ka/Ks Ratio 0.23381 (Ka = 0.0069, Ks = 0.0295)

LAMA4 ENSBTAG00000008817 (Cow)

Gene Details

laminin subunit alpha-4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011612, Cow)

Protein Percentage 94.96%
cDNA percentage 94.16%
Ka/Ks Ratio 0.15235 (Ka = 0.0246, Ks = 0.1615)

LAMA4  (Minke Whale)

Gene Details

laminin, alpha 4

External Links

Gene match (Identifier: BACU014228, Minke Whale)

Protein Percentage 99.47%
cDNA percentage 99.26%
Ka/Ks Ratio 0.11487 (Ka = 0.002, Ks = 0.0172)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5172 bp    Location:388374..538669   Strand:+
>bmy_16227
ATGGCTTTGAGCTCAGCCTGGTAYGCAGTCCTGCCCCTGTGGCTCTTCTGGGGCGCCGCCTGCTCCCGCGCCGCGTCTGGGGACGACAGCGCTTTTCCTTTTGACATTGAAGGGAGCTCAGCGGTCGGCCAACTAGACCCGCCTGAGACCATCGAGGCCCGCGTGGCTCTTGGAAGCCTGCCGCCTGCTGCCAAGCACTGCCAGCGGAACACAACAGGCGAGCACTGTGAGAAATGTCTAGATGGTTATATCGGAGATGCCATCAGGGGAGCACCCCGCGTCTGCCAGCCGTGCGCCTGCCCCCTGCCTCATGTTGCCAATTTTGCAGAATCCTGCTATAGGAAAAATGGAGCTGTTCGGTGTATTTGTAAAGAAAACTATGCTGGACCTAACTGTGAAAGATGTGCTCCTGGTTACTATGGAAACCCCTTGCTGATTGGAAGCACCTGTAAGAAATGTGACTGCAGTGGAAATTCAGATCCTAACCTGATCTTTGAAGACTGCGATGAGGTCACTGGCCAGTGTAGGAATTGCTTACGCAACACCACCGGATTCAAGTGTGAACACTGCGCACCTGGCTACTATGGGGATGCCAGGAGAGCCAAGAACTGTGCAGGCTGTGATAAGTGCATCTGGGATCTGACTGATGACCTTCGGTTAGCGGCACTCGCCATTGAAGAAAGCAAATCCGGTCTGCTGAGTGTGTCATCTGGTGCCGCTGCTCATAGGCATGTGAATGAAATCAACTCCACCATCTACCTCCTCAAAACAAAATTGTCAGAAAGAGAAAACCAATATGTCCTAAGAAAGATACAGATCAACAATGCTGAAAACACAATGAAAAGCCTTCTGTCTGACGTGGAGGAATTAGCTGGAAGGGAAAGTCAAGCCACAAGAAAGAGCCAGTTGGCTCAGAAGGAAAGCATGGATACCATTAACCACGCAACTCAGCTTGCAGAGCAAGCCCACGATGTGAGGGATAAAATCCAAGAGATCAACAACAAGATGCTCTATTATGGGAAAGATCAGGAACTTAGCCCTGAGGAAATCTCTGAGAAACTGGTGTTGGCCCAGAAGATGCTTGAGGAGATCCGACGCCGTCAACCGTTCCTCACCCAACGGGAACTTGTGGATGAGGAGGCAGACGAAGCCTATGAATTGCTGAGCCAGGCTGAGAGTTGGCAGCGGCAGTACAATGATACTCACTCTCTGTTTCCTGTGGTCCTGGAGCAGCTGGACGACTATAATGCTAAGTTGTCAGACCTCCAGGAGTCACTTGACCTGGCCCTTGACCATATCAGGGATGCCGAAGACATGAACAGAGCCACAGCAGCCAGGCAGCGGGATCACAAGAAACAGCATGACAGAGTGAGGGAACAGATGGCAGGGGTGAACGCGTCTCTGAGGATGTCTTCCGACTCACTAACTATGCCTCGGCTGACCCTTTCAGAACTTGATGACATAATAAAGAATGCATCAGGGATTTATGCTGAAATAGATGGAGCCAAAAATGAACTACAAAGAAAACTATCCAACCTAAGCAACCTCAGTCATGATTTAGTTCAGGAGGCTGTTGACCATGCACAGAACCTTCAACAAGAGGCTGATGAATTGAGCAGGAATTTGCACAGTTCAGATGTGAATGGGCTGGTACAGAAGGCTTTGGACGCTTCAAATGTCTATGAAAATATTGCCAATTATGTTACTGAAGCCAACGAAACGGCAGAACAGGCTTTGAACATCACTGATCGAATATATGATGCTGTGAGTGGGATTGATACACAAATCATTTACCATAAAGATGAGAGTGAGAACCTCCTCAATCAAGCCAGAGAGCTGCAAGCAAGGGCAAATTCTAGCAATGACGAGGCAGTGGCTGACACCAGTAGGCGCGTGGGTGGAGCCCTAGCAAGGAAGAGTGCCCTCAAAAACAGATTAAATGATGCCATTAAGAGACTACAAGCCACAGAGAGAGGTGACGCTCAGCAGCGCCTGGGTCAGTCCAAGCTGATCACCGCGGAAGCTAACAAGACCACAATGGAAGTCCAGCAGGCGGCCGCCCCGATGGCTAACAATCTAACCAACTGGTCACAGAATCTTCAACATTTTGACTCATCTGCTTACAACACTGCAGTGGACTCTGCCAGAGATGCAGTTGGAAATCTGACAGAGGTTGTCCCTCAGCTCCTGGATCAGCTTCGCACGGTAGAGCAGAAGCGGCCTGCAAGCAACGTTTCTGCCAGTATCCAGAGGATCCGAGAGCTCATTGCTCAGACCAGAAGCGTTGCCAGCAAGATCCAAGTCTCCATGATGTTTGATGGTCAGTCGGCAGTCGAAGTGCATCCCAAAGCCAGAATGGATGACTTAAAGACCTTTACGTCCCTGAGCCTGTACATGAAGCCTCCTCCTGTGAAGCAACCAGAGCTGGGTGGGACTGCAGATCAGTTCGTCCTATACCTCGGAAGCAAAAACGCCAAAAAAGAGTACATGGGTCTTGCAATCAAAAATGATAACCTGGTGTACGTTTATAATTTGGGAACTAAGGATGTAGAGATTCCCCTGGACTCCAAGCCTGTCAGTTCCTGGCCTGCTTACTTCAGCATTGTCAAGATTGAAAGGGTAGGAAAACACGGAAAGGTGTTTTTAACAGTCCCAAGTCTAAGTAGCACCGCAGAGGAAAAGTTTATTAAAAAGGGGGAATTTGCGGGAGATGACTCCTTGTTGGATCTGGATCCTGAGGACACTGTGTTTTATGTTGGTGGCGTGCCTTCAAACTTCAAGCTCCCTGCCAGCTTAAACCTGCCTGGCTTCGTTGGCTGCCTGGAATTGGCCACTTTGAACAACGATGTGATCAGCTTGTACAACTTTAAGCACATCTATAATATGGATCCCTCCAAATCAGTGCCCTGTGCCAGAGATAAACTGGCCTTTACTCAGAGTCGGGCTGCCAGCTATTTCTTCGATGGTTCTAGTTATGCCGTGGTGAGGGATATCACAAGGAGAGGGAAATTCGGTCAGGTGACYCGCTTTGACATAGAAGTYAGAACACCAGCTGACAACGGCCTTGTGCTCCTGATGGTCAATGGAAGTATGTTTTTCAGCCTGGAAATGCGCAATGGTTACCTACATGTGTCCTATGACTTTGGGTTTAGCAACGGCCCTGTGCATCTTGAAGACACAATGAAGAAAGCTCAAATTAATGATGCAAAATACCATGAGATCTCAATCATTTACCACAATGATAAGAAAATGATTTTGGTAGTTGACAGGCGACATGTCAAGAGCATGGACAATGAAAAGATGAAAGTACCTTTTACAGACATATACATTGGAGGAGCTCCCCCAGAAATCTTAGAATCAAGGACCCTAAGAGTACACCTTCCCCTGGATATCAATTTCAGAGGMTGCATGAAGGGTTTCCAGTTCCAAAAGAAAGATTTCAATTTATTAGAACAGACAGAAACCCTGGGAGTTGGTTATGGATGCCCAGAAGACTCTCTTATATCTCGCAGAGCATATTTCAATGGACAGAGTTTCATTGCTTCAATTCAGAAAATATCTTTTTTCGATGGCTTTGAGGGAGGTTTTAATTTCCRAACATTACAGCCAAATGGGTTACTATTCTATTATGCTTCAGGGTCAGACGTGTTCTCCATTTCATTGGATAATGGCACTGTGATCATGGATGTAAAGGGAATCAAGGTGCAGTCGGCAGATAAGCAGTATAATGACGGGCTGTCCCACTTCATCATTACCTCTGTCTCCCCCGCAAGGTATGAATTGATAGTAGATAAAAGCAGACTTGGGAGTAAGAACCCTACCAAAGGAAAAGTGGAACAGACACAAGCAGRTGAAAAGAAGTTCTACTTCGGTGGCTCACCCATCAGTCCCCAGTATGCTAATTTCACTGGCTGTATAAGTAATGCCTACTTTACCAGGTTGGATAGAGATGTGGAGGTCGAAGATTTCCAGCGGTATTCTGAAAAGGTCCATACTTCTCTTTATGAGTGTCCCATTGAGTCTTCGCCATTGTTTCTCCTTCACAAAAAAGGAAAAAATTCCTCAAAGCCTAAAACAAGTCAGAATAAAAAGGGAGAGAAAAGTAAAGATGCTCCTTCATGGGATCCTGTTGACCTGAAATTCCTAGAGAGGAATGTTCCAAGAGACTCTCACTGCCACCTTTCCAACAGCCCTAGAGCAATAGAGCACGCCTATCAGTACGGAGGGACAGCCAACAGCCGCCAAGAGTTTGAACACTTAAAAGGAGATTTTGGTGAAAAATCCCAGTTTTCCATTCGTCTGAAAACACGTTCCTCCCATGGGATGATTTTCTATGTCTCGGATCAAGAAGAGAATGACTTCATGGCTCTATTCTTAGCCCACGGCCGCTTGGTTTTCATGTTTAATGTTGGCCACAAGAAACTGAAGATTAGAAGCCAAGAGAAATACAATGATGGTTTGTGGCATGATATAAACTCAGTCTACAGCTTCAGTGGCTGCCTCAGCAATCTCCAGCTCAATGGGGCCTCCATCACCTCTGCTTCTCAGACATTTAGCGTGACTCCTTGTTTTGAAGGCCCAATGGAAACAGGAACGTACTTTTCAACAGAAGGAGGATACGTGGTTCTAGATGAGTCTTTCAATATTGGATTGAAGTTTGAGATTGCATTTGAAGTCCGTCCCAGAAGCAGTTCTGGAACCCTTGTTCACGGCCACAGTGTCAATGGGGAGTACCTAAATGTTCACATGAAAAATGGGCAGGTCATAGTGAAAGTCAATAATGGTATCAGAGACTTTTCCACCTTAGTGACACCCAAGCAGAGTCTCTGCGATGGCAGATGGCACAGAATTACAGTTATTAGAGATTCAAATGTGGTTCAGTTGGATGTAGACTCTGAAGTGAACCACGTGGTTGGACCCCTGAATCCAAAACCAGTTGATCACAGGGAGCCTGTGTTTGTTGGAGGTGTTCCAGGCTTCGGTTCTGAAAGAAATACTGCCAAAGACCACATTGCACTTCATGCAGAGTCTCTACTGACACCACGCTTGGCCCCTGGCAGACCCTTCACAGGCTGCATCCGTCACTTTGTGATTGACGGGCGCCCAGTGAGCTTCAGTAAAGCAGCCCTGGTCAGCGGTGCCGTGAGCATCAACTCCTGTCCAGCAGCCTGA

Related Sequences

bmy_16227T0 Protein

Length: 1724 aa      View alignments
>bmy_16227T0
MALSSAWYAVLPLWLFWGAACSRAASGDDSAFPFDIEGSSAVGQLDPPETIEARVALGSLPPAAKHCQRNTTGEHCEKCLDGYIGDAIRGAPRVCQPCACPLPHVANFAESCYRKNGAVRCICKENYAGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCEHCAPGYYGDARRAKNCAGCDKCIWDLTDDLRLAALAIEESKSGLLSVSSGAAAHRHVNEINSTIYLLKTKLSERENQYVLRKIQINNAENTMKSLLSDVEELAGRESQATRKSQLAQKESMDTINHATQLAEQAHDVRDKIQEINNKMLYYGKDQELSPEEISEKLVLAQKMLEEIRRRQPFLTQRELVDEEADEAYELLSQAESWQRQYNDTHSLFPVVLEQLDDYNAKLSDLQESLDLALDHIRDAEDMNRATAARQRDHKKQHDRVREQMAGVNASLRMSSDSLTMPRLTLSELDDIIKNASGIYAEIDGAKNELQRKLSNLSNLSHDLVQEAVDHAQNLQQEADELSRNLHSSDVNGLVQKALDASNVYENIANYVTEANETAEQALNITDRIYDAVSGIDTQIIYHKDESENLLNQARELQARANSSNDEAVADTSRRVGGALARKSALKNRLNDAIKRLQATERGDAQQRLGQSKLITAEANKTTMEVQQAAAPMANNLTNWSQNLQHFDSSAYNTAVDSARDAVGNLTEVVPQLLDQLRTVEQKRPASNVSASIQRIRELIAQTRSVASKIQVSMMFDGQSAVEVHPKARMDDLKTFTSLSLYMKPPPVKQPELGGTADQFVLYLGSKNAKKEYMGLAIKNDNLVYVYNLGTKDVEIPLDSKPVSSWPAYFSIVKIERVGKHGKVFLTVPSLSSTAEEKFIKKGEFAGDDSLLDLDPEDTVFYVGGVPSNFKLPASLNLPGFVGCLELATLNNDVISLYNFKHIYNMDPSKSVPCARDKLAFTQSRAASYFFDGSSYAVVRDITRRGKFGQVTRFDIEVRTPADNGLVLLMVNGSMFFSLEMRNGYLHVSYDFGFSNGPVHLEDTMKKAQINDAKYHEISIIYHNDKKMILVVDRRHVKSMDNEKMKVPFTDIYIGGAPPEILESRTLRVHLPLDINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNGQSFIASIQKISFFDGFEGGFNFXTLQPNGLLFYYASGSDVFSISLDNGTVIMDVKGIKVQSADKQYNDGLSHFIITSVSPARYELIVDKSRLGSKNPTKGKVEQTQAXEKKFYFGGSPISPQYANFTGCISNAYFTRLDRDVEVEDFQRYSEKVHTSLYECPIESSPLFLLHKKGKNSSKPKTSQNKKGEKSKDAPSWDPVDLKFLERNVPRDSHCHLSNSPRAIEHAYQYGGTANSRQEFEHLKGDFGEKSQFSIRLKTRSSHGMIFYVSDQEENDFMALFLAHGRLVFMFNVGHKKLKIRSQEKYNDGLWHDINSVYSFSGCLSNLQLNGASITSASQTFSVTPCFEGPMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVHGHSVNGEYLNVHMKNGQVIVKVNNGIRDFSTLVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVVGPLNPKPVDHREPVFVGGVPGFGSERNTAKDHIALHAESLLTPRLAPGRPFTGCIRHFVIDGRPVSFSKAALVSGAVSINSCPAA*