Sequence detailsbmy_16236 (Coding sequence)

Part of scaffold_1278 (SequenceType object (1))

For more information consult the page for scaffold_1278 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UCN3ENSTTRG00000014623 (Bottlenosed dolphin)

Gene Details

urocortin 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013866, Bottlenosed dolphin)

Protein Percentage 94.38%
cDNA percentage 96.25%
Ka/Ks Ratio 0.23296 (Ka = 0.024, Ks = 0.1031)

BT.60941ENSBTAG00000035696 (Cow)

Gene Details

urocortin-3 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000046927, Cow)

Protein Percentage 76.07%
cDNA percentage 82.0%
Ka/Ks Ratio 0.18957 (Ka = 0.1386, Ks = 0.7312)

Additional orthologs identified in other species via the OPTIC pipeline.

UCN3 (Human)   Ucn3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 501 bp    Location:204604..204104   Strand:-
Raw sequence 
>bmy_16236
ATGCTGATACCGGCCCACTTCCTGCTGCTACTGCTGCTGCTTCTAGGGGCCCCCAGGACAGGCCTCTCCCAAAAGTTGTACAAAGCTGAGTCCGTCTTCAGCTGCCTCAACACAGCCCTGTCTGAGGCCAAGAAGAGCCAGCTGGAGGGTGCGCCCCTGCTGAGCAAGAGAAGCTTCCCCTCCCTGCCCAGCCAAGACTCACTCTCAGGAGAAGACCAGGAGAAGGAGGAGGAGGAAGACAAGGAGAAAAGGACCTTCCCTGGCTCTGGGGGCGGCGGTGGGGCTAGAAGCACCCGGCACAAATACCTGTCCCAGGGGCAGCTCCGGCGGAGGCTGTACCAGGACAAGGCCAAGAGTGACCGGCGCACCAAGTTCACTCTGTCCCTCGATGTCCCCACTAACATCATGAACATCCTCTTCAACATTGCCAAGGCCAAGAACCTACGAGCCAAGGCAGCTGCCAACGCCCACCTGATGGCCCAGATTGGGCGGAAGAAGTAG

Related Sequences

bmy_16236T0 SequenceType object (3)

Length: 167 aa      View alignments
>bmy_16236T0
MLIPAHFLLLLLLLLGAPRTGLSQKLYKAESVFSCLNTALSEAKKSQLEGAPLLSKRSFPSLPSQDSLSGEDQEKEEEEDKEKRTFPGSGGGGGARSTRHKYLSQGQLRRRLYQDKAKSDRRTKFTLSLDVPTNIMNILFNIAKAKNLRAKAAANAHLMAQIGRKK*