Sequence detailsbmy_16251 (Coding sequence)

Part of scaffold_1264 (SequenceType object (1))

For more information consult the page for scaffold_1264 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZNF280CENSTTRG00000000914 (Bottlenosed dolphin)

Gene Details

zinc finger protein 280C

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000861, Bottlenosed dolphin)

Protein Percentage 59.1%
cDNA percentage 65.69%
Ka/Ks Ratio 1.39578 (Ka = 0.1146, Ks = 0.0821)

ZNF280CENSBTAG00000019885 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000026492, Cow)

Protein Percentage 64.7%
cDNA percentage 77.71%
Ka/Ks Ratio 0.74594 (Ka = 0.2596, Ks = 0.348)

ZNF280C (Minke Whale)

Gene Details

zinc finger protein 280C

External Links

Gene match (Identifier: BACU008840, Minke Whale)

Protein Percentage 90.07%
cDNA percentage 94.13%
Ka/Ks Ratio 0.80907 (Ka = 0.0595, Ks = 0.0736)

Additional orthologs identified in other species via the OPTIC pipeline.

ZNF280C (Human)   Zfp280c (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1962 bp    Location:575545..522477   Strand:-
Raw sequence 
>bmy_16251
ATGTTTTCACGCTCCTCCCTTTCCTCCTCCTCTTTCTCCTCCTCCGAGTTCCAGTCAGGCCGACCTGCTCTGCTCGCGGTGACTCTGCAGCTTGATGGACAACAACAACCCTTTTCAACCAAAAACATCTCATCCCTGCCTTGTCCTGTGCCTGATATTTTGAACAGAGGTAATCCCAGCTCATCTTCAAAGGGAATAAAGATTGAGACAGTCAGTCAAGGTGTTACTGATGATTTCAAGCCTACAAGTGAACACTACAAAGACCCGACATCAGATCCAGTGGCTGCCTTGCCTAGATTTCATCCTGAATCTAAATCTTCACGTAGCCCTGATATTGTTCAGGACATGTCTAAACCTGATTTTACAAAGAATTCATCACAAGATGAATTGGATGATTCTTCAGATTCAGTGTTCGACTTGACCCAGGTTACAATACCACTATCCCAAGATGGATCAACAGTTTATACAGAAGGTCTAGATGAAACTCCGCCTATAATAGAACGTTCTTCTGTTTCTAAAGTAGACAGTGTTACTCCAAAAAAGCCAAAGACCAGCGAAAGAGTTTCTGACATAAATCCTTGTGCTTCATTGTCTTTAACTAACTCTCCTTCAGTGACATCCTCCCATGTCTTGCTATCAAAAGGTACAAATACCTCACCAACTCTCCATAAAACTGGAACACCTTTTCTAAGATCTTGTCCAAAGTGCAATGTTCAGTTCAATCTTTTGGATCCTTTGAAATATCACATGAAGCGTTGTTGTCCAGACATGGTAAATGCATTTTTGGAAATGATTAAAGTAGAACTTTCCAGTACTGAAGGTAAAAATGAGACTGGTGCAGAGAAAGGAAAATTGATTATGTTAGTTAGTGACTTTTACTATGGAAGACATGAAGGAGCTGTTGATGTGGAACAGAAGACTTATACAACATTTAAATGCTTCAGTTGCTTGAAAGTTCTTAAAAATAACATTAGGTATGTAAATACTTATTTCTATTTCTATTTGAAAATTGGGATGCTACAGATGAGTTTGACACTTGGATCCACTTTAGTTGTTTGCCAGTTTAGATCATCAACATTTTCTGATGTAGAAACTCATTTTAGAGCATCCCATGAAAATACTAAGAACTTGCTGTGTCCATTTTGCCTCAAAGTTAGTAGAATGGCAACCCCCTACATGAATCATTACATGAAGCATCAGAAGAAAGGAGTTCATCGTTGTACAAAATGCAGACTACAATTTTTGACCTACAAAGAGAAACTGGATCACAAGACCCAGCATCGGACATTTATAAAGCCTAAAGAGCTAGAAGGATTGCCTCCTGGTACAAAAGTTACTATTCGAGCTTCAGTTGGACCTCTTCATTCAGGGTCATCAACTACATCTTCCAAGAATACTCCAGGCACTTCTTCTCTTCAGGTCTCACCTCCAAAGTCTACAAGTACAACTGCTGAAAATCCTACAAGAGCTAATGAAAGTAAATATAAGACAAGAAAGCCTTGTGCAGCTACGTCCACTGCAAGTAAGCAAGGTAGAGGTGCATTTGAATATAAAGCAAAAACCTATTACAAGCAAAAGAAAGAGCGCAACAGGAAGAATAAAATCAGCATAGCTTTGAAGAACTTAAGGTGTCTTCGGGGAGTTCACAAGTGCATTGAGTGTCGTTCCAGAATAAAAGATTTTGCAAGCCACTTTTCAATATATATGCACTGTAATTTTTGCAGATACAAAACAAACTGTAACAAAGCCTTTGTAAACCATATGGTGAGCTCTCATAGCAACCAGCCAACTAAACGGTTTTATATTTTTAAGAAGCATTCTGGAACTCTCAGGGGCATTACTCTGGTGTGCCTTAAATGTGATTTCCTAACTGATTCTTCTGGTTTAGATCTTATGGCTAAACACTTAAGTCAACGTAAAACTCATACTTGCCAAGTTATAGTAGAGAATGCCGCTTGTTGA

Related Sequences

bmy_16251T0 SequenceType object (3)

Length: 654 aa      View alignments
>bmy_16251T0
MFSRSSLSSSSFSSSEFQSGRPALLAVTLQLDGQQQPFSTKNISSLPCPVPDILNRGNPSSSSKGIKIETVSQGVTDDFKPTSEHYKDPTSDPVAALPRFHPESKSSRSPDIVQDMSKPDFTKNSSQDELDDSSDSVFDLTQVTIPLSQDGSTVYTEGLDETPPIIERSSVSKVDSVTPKKPKTSERVSDINPCASLSLTNSPSVTSSHVLLSKGTNTSPTLHKTGTPFLRSCPKCNVQFNLLDPLKYHMKRCCPDMVNAFLEMIKVELSSTEGKNETGAEKGKLIMLVSDFYYGRHEGAVDVEQKTYTTFKCFSCLKVLKNNIRYVNTYFYFYLKIGMLQMSLTLGSTLVVCQFRSSTFSDVETHFRASHENTKNLLCPFCLKVSRMATPYMNHYMKHQKKGVHRCTKCRLQFLTYKEKLDHKTQHRTFIKPKELEGLPPGTKVTIRASVGPLHSGSSTTSSKNTPGTSSLQVSPPKSTSTTAENPTRANESKYKTRKPCAATSTASKQGRGAFEYKAKTYYKQKKERNRKNKISIALKNLRCLRGVHKCIECRSRIKDFASHFSIYMHCNFCRYKTNCNKAFVNHMVSSHSNQPTKRFYIFKKHSGTLRGITLVCLKCDFLTDSSGLDLMAKHLSQRKTHTCQVIVENAAC*