Sequence details bmy_16264 (Coding sequence)

Part of scaffold_1268 (Scaffold)

For more information consult the page for scaffold_1268 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYDE2 ENSTTRG00000001326 (Bottlenosed dolphin)

Gene Details

synapse defective 1, Rho GTPase, homolog 2 (C. elegans)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001246, Bottlenosed dolphin)

Protein Percentage 97.01%
cDNA percentage 98.46%
Ka/Ks Ratio 0.60577 (Ka = 0.013, Ks = 0.0215)

SYDE2 ENSBTAG00000003444 (Cow)

Gene Details

rho GTPase-activating protein SYDE2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004474, Cow)

Protein Percentage 90.86%
cDNA percentage 93.12%
Ka/Ks Ratio 0.28796 (Ka = 0.0453, Ks = 0.1573)

SYDE2  (Minke Whale)

Gene Details

synapse defective 1, Rho GTPase, homolog 2 (C. elegans)

External Links

Gene match (Identifier: BACU004609, Minke Whale)

Protein Percentage 99.11%
cDNA percentage 99.34%
Ka/Ks Ratio 0.32408 (Ka = 0.0037, Ks = 0.0114)

Additional orthologs identified in other species via the OPTIC pipeline.

SYDE2 (Human)   Syde2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 4374 bp    Location:479376..518370   Strand:+
Raw sequence 
>bmy_16264
ATGCGCTCTGCGGCGCCGCCGCCCTCCCCCACCCGTCCCGTGGCAGAGTTATGCCAAGAATGTGAGGAGCCCGCGAGGGCCAGTGTAGGTCATGGGGAGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGAGCGCGGCTTTCTCCCGAGCGGGGCTCCGAGCTCTCCCCGCACCAGGGGCGAGCCTGGCTGCTGAGGCGGAGGGGGATGACGGACCCTTTGAGGAGGACGCTGTCCAGGCTCCGGGGGAGGCGGGGTCCTCGCGCCGCCGGGGGGCCCGGGCGCCGGGCGGCCGCAGCAGCCACCGTGGCGGCCTCTTCGGCTGCCGAGGGAGACGCCGGGGGTGCTCCGGGCGGGCCCCTACGGGAGCGCGCCAGCGGAGCCCGGCCGAGCCTGGAGCGACCGCCGCCGTCGCCTCAGGCGTGGGGTCCTGAGGCGCGGGTCCCGGGAGGGCGGCCGGAGAGGTCGGGGGCGCTCGGGCCTCGGCCGCGCGTCGGGAAGGAGGCTGCACCCCCGGGCCGCGGGCTCACTCGCGCCTCTCTGTACGCTCCGCCGGGCTCCGAGGGCAGCGGAGAGGACGAGGAGGACGACGCCGACTACTACGAGAACCTGCCCGGCGGCTCCCAGCCCGCGCCGGAGCCTGAGGGGGCGGAGGCGGAGCGGTGGCCCCCGCCTCCCCCGGCCGCTGGCTCCTCCCCAGGGGCGGAGGGCGGCCGTCTGGAGACAGGCAGGCTGCAGACCCAGTTGCGAGAGGCCTATTATCTGCTGATCCAGGCCATGCACGACCTGCCCCCTGACTCGGGCAGGCGGCAGGGCGACCGGGGCAGGGCGGATCGCGGCTGCCCTGCGGGAGCCCGGGCTCCGGGCCAGCCGCCTTCCCCCTGCGGCGCGGCGGCCCGCCGAGCCTGCCCCCGAGACTGCGAGCGGGGAGGCGGCGGCCGCCCTTGGCAGCAGGTGTCCCCGCCCCGGTCGCCTCCGAAGGAGTCGGGGGGAGGCCGCCCGCGGACTCCTCGGATGCTGCTGTCCTGCAGCAGAAGCCTCGACAGCCTCCGCGTGGGTGCCAAGCCGCCTCCCTTACAGCGGTGGCGGAGCGACAGCTGGATCAGGTGCGGCGCGCGCGGGGAACCGGAGGAGCCCCCGCCACGTGGAGGCGGGATGGACGGCTGGAGCGGAGGCAGCTCCCGGGCCGCGGCGCCCTCCGGCCTCCGTACTCGCAGCTCCGAGGACCCCCGCCGCTCCTCGGGAAGCCGCGGCAAAGAAGACGGCCAGGAGGGGCTCCCCTTCCTCAAACCGCCCGCGGTGACAGTCAAGAAGCTGCAGAAGTGGATGTACAAAGGACGCCTGCTGTCCCTGGGAATGAAGGGTCGCGCTCGTAGGACACCCCCCGAAGTCACCCGAGCGCAGGCAACGTCTCCAAATCTGGGTGCTTTGAAAATGCGGGAAAGCCAAGTCGTCTCGGTGCCGCCAGACCAAAGAATTACGCTGACAGCTCTAAATTCTTCTGTTAGAAATTCTGCCATCGTGGCCCCAGAAGCAAACTTATTTGAAAATGTCTATGAGTCTTCAATGAAGAGAAGAGAACTTGAAGATCTGAATGATAATATTGGCTTCAGGGGTCATAAGCCACTTAATAGCATCACTGTGTCAAAGAAACGCAATTGGCTATATCAGAGTACTCTGAGATCTTTTAATTTGGAAGAAGAAAATAAGAAATGCCAAGATATAAGTCATTTATCCATCTCACCCGTTTCTCTACCTAAACTGCAGCTGTCACGACCTTTCCTCAAATCATCTGAAGAATATTGTACGTATATGGTGTGTAATGCTACAAATTCTTCATTATCAAGAAACTGTTCATTAGACTTTAATGAGGAAAATGATGCAGATGATGAAGGAGAAATATGGTACAACCCCATTCCTGAAGATGATGACTTTGGTATATCAAATGCCTTGAGTTTTGGGGAGGCAGACTCTGCTGTTCTGAAGTTTCCTGATGTCGGTTTGAGAGTATTATCTGGTAGTGACCTAACGAAAGGAGAGCAGCACACTGAAGACTTGCTGTGCTCTTCTGAACACACAGGCGATGTTCAGACCACACAGTCAAATGAAATAAATCCTATAGATTCCACCTATTCCACAGAGTTTGTGCAGCAGTACAAGCAAAGGCATGGACACAAGACACAAGAAGGTATAATAGTAGAGGAGAGTCCCATGTTGAGATCTCCTTTTGCAGGTCCTGGGATAGTAGCTGCTACAAATAAGCCTGATTTGGGAGTTACAGAACCATCTTCTACAAGCCCTAGCCCTGTGAAAAAAGGCAGTTCAATTCATTGGTCTTTCCCGGATAAAATAAAATCTCCACGAACTGTGAGGAAACTTTCCATGAAAATGAAAAGGTTGCCAGAATTTAGCCGGAAACTGAGTGTTAAAGGAACCTTGAATTATGGAAACAGTCCGGATAATACTCCTTCCTTGTCTAAATGTAACTGTCAAGAAATTCATCATGCTGTTATTCTACCTTCTGGGAACACAACCACAGCTGCTAAGAGGAATGTTATAAGCCGGTACCATCTTGATACTAGTGTGTCTTCTCAGCACAGCTACCAGAAGAAAACCTCTGTGAGTTCTAAGTATTCCTGCAAAAGTGGTTACCTCAGTGATGGAGATTCTCCTGAACTTATAGCTAAATCTAGCAAACATGGATGTGAAAACAAATTTGCAAAAGGAAAAGAAATAATTCCAAAYAGTTGCAGCAAGAATGAAATAGACATTGATGCTTTTAGACATTATAGCTTTTCTGATCAACCTAAGTGTTCTCAGTACATATCTGGGCTCATGAGTGTGCATTTCTATGGTGCTGAGGATTTAAAACCACCTCGGATAGATTCAAAAGATGTCTTTTGTGCAATTCAGGTAGATTCAGTAAACAAAGCCAGAACAGCTTTGCTCACATGTCGGACAACGTTTTTAGACATGGATCACACTTTCAACATAGAAATTGAAAATGCACAGCATTTGAAATTAGTAGTATTCAGTTGGGAACCCACTCCAAGAAAAAATCGAGTGTGTTGTCATGGAACTGTTGTTCTTCCCACCTTATTCAGAGTGACAAAGACACATCAGTTGGCTGTCAAACTTGAACCTAGAGGTCTTATTTATGTGAAAGTGACTCTTTTGGAACAGTGGGAGAATTCACTTCATGGACTAGATATAAATCGAGAACCAGTAATATTTGGTGTTGATATTCGAGAAGTTGTAGAGAAAGAAAATATAGGCTTGATGGTACCACTCCTGATTCAGAAATGTATTATGGAAATTGAAAAGAGAGGCTGTCAGGTAGTTGGCCTGTACCGATTATGTGGCTCGGCAGCAGTCAAGAAAGAACTTCGAGAGGCTTTTGAGAAGGATAGCAAAGCTGTTGGTCTGTGTGAAAGCCAATACCCAGATATAAATGTAATAACAGGTGTTCTTAAGGATTATTTAAGAGAACTTCCTTCTCCTCTGATAACAAAGCAACTTTATGAGGCTGTATTAGATGCAATGGCAAAAAATCCTTTGAAAATGTCATCAAATGGTTGTGAGAATGATCCAAGTGATTCTAAGTACACTGTTGACCTGCTGGATTGTCTGCCTGACGTTGAGAAGGCAACCCTAATGATGTTGTTGGATCATTTGAAATTGGTGGCTTCTTATCGTGACGTGAATAAGATGACTTGCCAGAATTTGGCTGTGTGCTTTGGACCCGTATTATTAAGTCAGAGGCAAGAGACTTCCACCCATAACAACAGAGTCTTCACTGATTCAGAAGAACTTGCAAGTGCTTTGGATTTTAAAAAACATATTGAAGTTCTTCATTACTTACTTCAACTCTGGCCAGTGCAACGTTTAACTATCAAAGAATCAGCAAACAATTTGTTCCCAGAGCACAAGTCTTCTCTAAATTATTTGAGGCGGAAGAAAGAACGACCTTACCTGTTAAATTTGAGTGGTACTGATTCATCAAGAGTACTTAGGCCAAGGCAAACCAGGTTAGACAGTCCACTAAGTAATCGTTATGCAGGAGACTGGAGCAGCTGTGGAGAAAACTACTTTTTAAATATGAAAGAAAATTTAAATGATGTGGATTATGACGATGTGCCTTCAGAAGACAGAGAAAATGGAGAAAACTGTAGCAAAATGTATGAACCAGATATCATGATTGAACAGCCAACTCCCACATCCAAAGAGTGCACATTTCAGACATATTTGACAATGCAGGCTATTGAGTCTAGGGACCRAAAAGTCAATCTCAAAGATCTACAAGAAAGTATCGATACTTTGATTGGAAATCTGGAGCGTGAACTCAACAAAAACAAGCTTAATATGAGTGTTTGA

Related Sequences

bmy_16264T0 Protein

Length: 1458 aa      View alignments
>bmy_16264T0
MRSAAPPPSPTRPVAELCQECEEPARASVGHGEPPPPPPPPPPRARLSPERGSELSPHQGRAWLLRRRGMTDPLRRTLSRLRGRRGPRAAGGPGRRAAAAATVAASSAAEGDAGGAPGGPLRERASGARPSLERPPPSPQAWGPEARVPGGRPERSGALGPRPRVGKEAAPPGRGLTRASLYAPPGSEGSGEDEEDDADYYENLPGGSQPAPEPEGAEAERWPPPPPAAGSSPGAEGGRLETGRLQTQLREAYYLLIQAMHDLPPDSGRRQGDRGRADRGCPAGARAPGQPPSPCGAAARRACPRDCERGGGGRPWQQVSPPRSPPKESGGGRPRTPRMLLSCSRSLDSLRVGAKPPPLQRWRSDSWIRCGARGEPEEPPPRGGGMDGWSGGSSRAAAPSGLRTRSSEDPRRSSGSRGKEDGQEGLPFLKPPAVTVKKLQKWMYKGRLLSLGMKGRARRTPPEVTRAQATSPNLGALKMRESQVVSVPPDQRITLTALNSSVRNSAIVAPEANLFENVYESSMKRRELEDLNDNIGFRGHKPLNSITVSKKRNWLYQSTLRSFNLEEENKKCQDISHLSISPVSLPKLQLSRPFLKSSEEYCTYMVCNATNSSLSRNCSLDFNEENDADDEGEIWYNPIPEDDDFGISNALSFGEADSAVLKFPDVGLRVLSGSDLTKGEQHTEDLLCSSEHTGDVQTTQSNEINPIDSTYSTEFVQQYKQRHGHKTQEGIIVEESPMLRSPFAGPGIVAATNKPDLGVTEPSSTSPSPVKKGSSIHWSFPDKIKSPRTVRKLSMKMKRLPEFSRKLSVKGTLNYGNSPDNTPSLSKCNCQEIHHAVILPSGNTTTAAKRNVISRYHLDTSVSSQHSYQKKTSVSSKYSCKSGYLSDGDSPELIAKSSKHGCENKFAKGKEIIPNSCSKNEIDIDAFRHYSFSDQPKCSQYISGLMSVHFYGAEDLKPPRIDSKDVFCAIQVDSVNKARTALLTCRTTFLDMDHTFNIEIENAQHLKLVVFSWEPTPRKNRVCCHGTVVLPTLFRVTKTHQLAVKLEPRGLIYVKVTLLEQWENSLHGLDINREPVIFGVDIREVVEKENIGLMVPLLIQKCIMEIEKRGCQVVGLYRLCGSAAVKKELREAFEKDSKAVGLCESQYPDINVITGVLKDYLRELPSPLITKQLYEAVLDAMAKNPLKMSSNGCENDPSDSKYTVDLLDCLPDVEKATLMMLLDHLKLVASYRDVNKMTCQNLAVCFGPVLLSQRQETSTHNNRVFTDSEELASALDFKKHIEVLHYLLQLWPVQRLTIKESANNLFPEHKSSLNYLRRKKERPYLLNLSGTDSSRVLRPRQTRLDSPLSNRYAGDWSSCGENYFLNMKENLNDVDYDDVPSEDRENGENCSKMYEPDIMIEQPTPTSKECTFQTYLTMQAIESRDXKVNLKDLQESIDTLIGNLERELNKNKLNMSV*